PDB entry 4dej

View 4dej on RCSB PDB site
Description: Crystal structure of glutathione transferase-like protein IL0419 (Target EFI-501089) from Idiomarina loihiensis L2TR
Class: transferase
Keywords: transferase-like protein, transcription regulation, transferase
Deposited on 2012-01-20, released 2012-02-01
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-02-22, with a file datestamp of 2012-02-17.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.21
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4deja1, d4deja2
  • Chain 'B':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4dejb1, d4dejb2
  • Chain 'C':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4dejc1, d4dejc2
  • Chain 'D':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4dejd1, d4dejd2
  • Chain 'E':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4deje1, d4deje2
  • Chain 'F':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4dejf1, d4dejf2
  • Chain 'G':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4dejg1, d4dejg2
  • Chain 'H':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4dejh1, d4dejh2
  • Chain 'I':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4deji1, d4deji2
  • Chain 'J':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209-210)
    Domains in SCOPe 2.04: d4dejj1, d4dejj2
  • Chain 'K':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5R0K1 (Start-208)
      • expression tag (209)
    Domains in SCOPe 2.04: d4dejk1, d4dejk2
  • Chain 'L':
    Compound: Glutathione S-transferase related protein
    Species: Idiomarina loihiensis [TaxId:283942]
    Gene: sspA, IL0419
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4dejl1, d4dejl2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4dejA (A:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejA (A:)
    krsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdr
    elvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqar
    qelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvr
    lferktfqdslteeekelarna
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4dejB (B:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejB (B:)
    rsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdre
    lvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarq
    elkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrl
    ferktfqdslteeekelarna
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4dejC (C:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejC (C:)
    rsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdre
    lvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarq
    elkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrl
    ferktfqdslteeekelarna
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4dejD (D:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejD (D:)
    nkrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvd
    relvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqa
    rqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymv
    rlferktfqdslteeekelarna
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4dejE (E:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejE (E:)
    svmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdrel
    vlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarqe
    lkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrlf
    erktfqdslteeekelarna
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4dejF (F:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejF (F:)
    svmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdrel
    vlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarqe
    lkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrlf
    erktfqdslteeekela
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4dejG (G:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejG (G:)
    rsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdre
    lvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarq
    elkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrl
    ferktfqdslteeekelarna
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4dejH (H:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejH (H:)
    rsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdre
    lvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarq
    elkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrl
    ferktfqdslteeekelarna
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >4dejI (I:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejI (I:)
    svmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdrel
    vlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarqe
    lkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrlf
    erktfqdslteeekelarna
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >4dejJ (J:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejJ (J:)
    rsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdre
    lvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarq
    elkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrl
    ferktfqdslteeekelarnae
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >4dejK (K:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejK (K:)
    rsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdre
    lvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarq
    elkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrl
    ferktfqdslteeekelarna
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >4dejL (L:)
    mvmavaankrsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpype
    akptlvdrelvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaeki
    qkndaqarqelkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgak
    eikqymvrlferktfqdslteeekelarnaenlyfqshhhhhhwshpqfek
    

    Sequence, based on observed residues (ATOM records): (download)
    >4dejL (L:)
    rsvmtlysgkddlkshqvrlvlaekgvgveityvtdestpedllqlnpypeakptlvdre
    lvlynaqiimeylderfphpplmpvypvargtsrlmmyrierdwyslaekiqkndaqarq
    elkegilslapifadtpyfmseefslvdcylapllwrlpaygidlegqgakeikqymvrl
    ferktfqdslteeekelarn