SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2192501Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2192753Superfamily d.129.3: Bet v1-like [55961] (11 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 2192754Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like [55962] (5 protein domains)

Protein Domains:

  1. 2192755Hypothetical protein At1G24000 [103251] (1 species)
  2. 2192761Major allergen api g 1 [143819] (1 species)
  3. 2192764Major tree pollen allergen [55963] (4 species)
    1. 2192765Species European white birch (Betula pendula), Bet v 1-l [TaxId:3505] [82782] (1 PDB entry)
    2. 2192767Species European white birch (Betula pendula), Bet v I-a [TaxId:3505] [55965] (1 PDB entry)
    3. 2192772Species Sweet cherry (Prunus avium), pru av 1 [TaxId:42229] [64387] (2 PDB entries)
    4. 2192775Species White birch (Betula verrucosa), Bet v 1 [TaxId:3505] [55964] (22 PDB entries)
  4. 2192805Plant pathogenesis-related protein PR10 [75543] (2 species)
    1. 2192806Species Jicama (Pachyrhizus erosus), SPE-16 [TaxId:109171] [143818] (1 PDB entry)
      Uniprot Q6T6J0 2-148
    2. 2192808Species Yellow lupine (Lupinus luteus) [TaxId:3873] [75544] (6 PDB entries)
  5. 2192817automated matches [190058] (6 species)
    not a true protein
    1. 2192818Species Betula pendula [TaxId:3505] [195294] (4 PDB entries)
    2. 2192823Species Carrot (Daucus carota) [TaxId:4039] [189035] (1 PDB entry)
    3. 2192828Species Pachyrhizus erosus [TaxId:109171] [186778] (2 PDB entries)
    4. 2192832Species Soybean (Glycine max) [TaxId:3847] [255325] (1 PDB entry)
    5. 2192834Species Yellow lupine (Lupinus luteus) [TaxId:3873] [186854] (2 PDB entries)
    6. 2286530Species Malus domestica [TaxId:3750] [329831] (1 PDB entry)

More info for Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like

Timeline for Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like: