SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Malus domestica [TaxId: 3750]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2192501Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2192753Superfamily d.129.3: Bet v1-like [55961] (11 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 2192754Family d.129.3.1: Pathogenesis-related protein 10 (PR10)-like [55962] (5 protein domains)
  6. 2192817Protein automated matches [190058] (6 species)
    not a true protein
  7. 2286530Species Malus domestica [TaxId:3750] [329831] (1 PDB entry)

PDB entry in Species: Malus domestica [TaxId: 3750]:

More info for Species Malus domestica [TaxId:3750] from d.129.3.1 automated matches

Timeline for Species Malus domestica [TaxId:3750] from d.129.3.1 automated matches:

  • Species Malus domestica [TaxId:3750] from d.129.3.1 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-02-15