SCOP 1.73: Species: Rat (Rattus norvegicus), GluR2 [TaxId: 10116]

Lineage for Species: Rat (Rattus norvegicus), GluR2 [TaxId: 10116]

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.1: Phosphate binding protein-like [53851] (35 proteins)
Protein Glutamate receptor ligand binding core [53881] (4 species)
Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] [53882] (53 PDB entries)

PDB entries in Species: Rat (Rattus norvegicus), GluR2 [TaxId: 10116]:

Domain(s) for 1ftj:
1. Domain d1ftja_: 1ftj A: [35826]
2. Domain d1ftjb_: 1ftj B: [35827]
3. Domain d1ftjc_: 1ftj C: [35828]
  complexed with glu, zn
Domain(s) for 1ftk:
- Domain d1ftka_: 1ftk A: [35819]
  complexed with kai
Domain(s) for 1ftl:
1. Domain d1ftla_: 1ftl A: [35823]
2. Domain d1ftlb_: 1ftl B: [35824]
  complexed with dnq, so4
Domain(s) for 1ftm:
1. Domain d1ftma_: 1ftm A: [35820]
2. Domain d1ftmb_: 1ftm B: [35821]
3. Domain d1ftmc_: 1ftm C: [35822]
  complexed with amq, zn
Domain(s) for 1fto:
1. Domain d1ftoa_: 1fto A: [35829]
2. Domain d1ftob_: 1fto B: [35830]
Domain(s) for 1fw0:
- Domain d1fw0a_: 1fw0 A: [35831]
  complexed with kai
Domain(s) for 1gr2:
- Domain d1gr2a_: 1gr2 A: [35825]
  complexed with kai
Domain(s) for 1lb8:
1. Domain d1lb8a_: 1lb8 A: [73800]
2. Domain d1lb8b_: 1lb8 B: [73801]
  complexed with amq; mutant
Domain(s) for 1lb9:
1. Domain d1lb9a_: 1lb9 A: [73802]
2. Domain d1lb9b_: 1lb9 B: [73803]
  complexed with dnq, so4; mutant
Domain(s) for 1lbb:
- Domain d1lbba_: 1lbb A: [73804]
  complexed with kai; mutant
Domain(s) for 1lbc:
1. Domain d1lbca_: 1lbc A: [73805]
2. Domain d1lbcb_: 1lbc B: [73806]
3. Domain d1lbcc_: 1lbc C: [73807]
  complexed with cyz, glu, zn; mutant
Domain(s) for 1m5b:
1. Domain d1m5ba_: 1m5b A: [78637]
2. Domain d1m5bb_: 1m5b B: [78638]
3. Domain d1m5bc_: 1m5b C: [78639]
  complexed with bn1, zn
Domain(s) for 1m5c:
- Domain d1m5ca_: 1m5c A: [78640]
  complexed with brh
Domain(s) for 1m5d:
- Domain d1m5da_: 1m5d A: [78641]
  complexed with brh, so4; mutant
Domain(s) for 1m5e:
1. Domain d1m5ea_: 1m5e A: [78642]
2. Domain d1m5eb_: 1m5e B: [78643]
3. Domain d1m5ec_: 1m5e C: [78644]
  complexed with act, am1, zn
Domain(s) for 1m5f:
1. Domain d1m5fa_: 1m5f A: [78645]
2. Domain d1m5fb_: 1m5f B: [78646]
3. Domain d1m5fc_: 1m5f C: [78647]
  complexed with act, am1, zn; mutant
Domain(s) for 1mm6:
1. Domain d1mm6a_: 1mm6 A: [79296]
2. Domain d1mm6b_: 1mm6 B: [79297]
  complexed with gol, qus, so4
Domain(s) for 1mm7:
1. Domain d1mm7a_: 1mm7 A: [79298]
2. Domain d1mm7b_: 1mm7 B: [79299]
3. Domain d1mm7c_: 1mm7 C: [79300]
  complexed with qus, zn
Domain(s) for 1mqd:
1. Domain d1mqda_: 1mqd A: [85049]
2. Domain d1mqdb_: 1mqd B: [85050]
3. Domain d1mqdc_: 1mqd C: [85051]
4. Domain d1mqdd_: 1mqd D: [85052]
  complexed with gol, shi, so4
Domain(s) for 1mqg:
1. Domain d1mqga_: 1mqg A: [91395]
2. Domain d1mqgb_: 1mqg B: [91396]
  complexed with gol, iwd, so4
Domain(s) for 1mqh:
- Domain d1mqha_: 1mqh A: [91397]
  complexed with bwd
Domain(s) for 1mqi:
- Domain d1mqia_: 1mqi A: [91398]
  complexed with fwd
Domain(s) for 1mqj:
- Domain d1mqja_: 1mqj A: [91399]
  complexed with hwd, zn
Domain(s) for 1ms7:
1. Domain d1ms7a_: 1ms7 A: [85081]
2. Domain d1ms7b_: 1ms7 B: [85082]
3. Domain d1ms7c_: 1ms7 C: [85083]
  complexed with shi, zn
Domain(s) for 1mxu:
1. Domain d1mxua_: 1mxu A: [85199]
2. Domain d1mxub_: 1mxu B: [85200]
3. Domain d1mxuc_: 1mxu C: [85201]
  complexed with bwd, zn
Domain(s) for 1mxv:
1. Domain d1mxva_: 1mxv A: [85202]
2. Domain d1mxvb_: 1mxv B: [85203]
3. Domain d1mxvc_: 1mxv C: [85204]
  complexed with zn
Domain(s) for 1mxw:
1. Domain d1mxwa_: 1mxw A: [85205]
2. Domain d1mxwb_: 1mxw B: [85206]
3. Domain d1mxwc_: 1mxw C: [85207]
  complexed with zn
Domain(s) for 1mxx:
1. Domain d1mxxa_: 1mxx A: [85208]
2. Domain d1mxxb_: 1mxx B: [85209]
3. Domain d1mxxc_: 1mxx C: [85210]
  complexed with zn
Domain(s) for 1mxy:
1. Domain d1mxya_: 1mxy A: [85211]
2. Domain d1mxyb_: 1mxy B: [85212]
3. Domain d1mxyc_: 1mxy C: [85213]
  complexed with zn
Domain(s) for 1mxz:
1. Domain d1mxza_: 1mxz A: [85214]
2. Domain d1mxzb_: 1mxz B: [85215]
3. Domain d1mxzc_: 1mxz C: [85216]
  complexed with zn
Domain(s) for 1my0:
1. Domain d1my0a_: 1my0 A: [85217]
2. Domain d1my0b_: 1my0 B: [85218]
3. Domain d1my0c_: 1my0 C: [85219]
  complexed with zn
Domain(s) for 1my1:
1. Domain d1my1a_: 1my1 A: [85220]
2. Domain d1my1b_: 1my1 B: [85221]
3. Domain d1my1c_: 1my1 C: [85222]
  complexed with zn
Domain(s) for 1my2:
1. Domain d1my2a_: 1my2 A: [85223]
2. Domain d1my2b_: 1my2 B: [85224]
3. Domain d1my2c_: 1my2 C: [85225]
  complexed with amq, zn
Domain(s) for 1my3:
1. Domain d1my3a_: 1my3 A: [85226]
2. Domain d1my3b_: 1my3 B: [85227]
3. Domain d1my3c_: 1my3 C: [85228]
  complexed with bwd, zn
Domain(s) for 1my4:
1. Domain d1my4a_: 1my4 A: [85229]
2. Domain d1my4b_: 1my4 B: [85230]
3. Domain d1my4c_: 1my4 C: [85231]
  complexed with iwd, zn
Domain(s) for 1n0t:
1. Domain d1n0ta_: 1n0t A: [85243]
2. Domain d1n0tb_: 1n0t B: [85244]
3. Domain d1n0tc_: 1n0t C: [85245]
4. Domain d1n0td_: 1n0t D: [85246]
  complexed with act, at1, so4
Domain(s) for 1nnk:
- Domain d1nnka_: 1nnk A: [85905]
  complexed with ce2, cl, zn
Domain(s) for 1nnp:
1. Domain d1nnpa_: 1nnp A: [85908]
2. Domain d1nnpb_: 1nnp B: [85909]
  complexed with ce2, so4
Domain(s) for 1p1n:
- Domain d1p1na_: 1p1n A: [87698]
  complexed with kai; mutant
Domain(s) for 1p1o:
- Domain d1p1oa_: 1p1o A: [87699]
  complexed with qus, so4; mutant
Domain(s) for 1p1q:
1. Domain d1p1qa_: 1p1q A: [87700]
2. Domain d1p1qb_: 1p1q B: [87701]
3. Domain d1p1qc_: 1p1q C: [87702]
  complexed with amq, zn; mutant
Domain(s) for 1p1u:
1. Domain d1p1ua_: 1p1u A: [87711]
2. Domain d1p1ub_: 1p1u B: [87712]
  complexed with amq, so4; mutant
Domain(s) for 1p1w:
1. Domain d1p1wa_: 1p1w A: [87713]
2. Domain d1p1wb_: 1p1w B: [87714]
  complexed with amq, so4; mutant
Domain(s) for 1syh:
- Domain d1syha1: 1syh A:0-258 [119077]
  automatically matched to d1mm6a_
  complexed with cpw
Domain(s) for 1syi:
1. Domain d1syia1: 1syi A:1-258 [119078]
  automatically matched to d1m5da_
  complexed with cpw; mutant
2. Domain d1syib1: 1syi B:1-258 [119079]
  automatically matched to d1m5da_
  complexed with cpw; mutant
Domain(s) for 1wvj:
- Domain d1wvja1: 1wvj A:3-261 [121342]
  automatically matched to d1mm6a_
  complexed with gol, ibc, so4
Domain(s) for 1xhy:
- Domain d1xhya1: 1xhy A:1-258 [122011]
  automatically matched to d1m5da_
  complexed with kai, so4; mutant
Domain(s) for 2aix:
- Domain d2aixa1: 2aix A:1-258 [126838]
  automatically matched to d1mm6a_
  complexed with u1k
Domain(s) for 2al4:
1. Domain d2al4a1: 2al4 A:4-261 [126958]
  automatically matched to d1mm6a_
  complexed with cx6, qus, zn; mutant
2. Domain d2al4b1: 2al4 B:3-261 [126959]
  automatically matched to d1mm6a_
  complexed with cx6, qus, zn; mutant
3. Domain d2al4c1: 2al4 C:4-261 [126960]
  automatically matched to d1mm6a_
  complexed with cx6, qus, zn; mutant
4. Domain d2al4d1: 2al4 D:4-261 [126961]
  automatically matched to d1mm6a_
  complexed with cx6, qus, zn; mutant
5. Domain d2al4e1: 2al4 E:3-261 [126962]
  automatically matched to d1mm6a_
  complexed with cx6, qus, zn; mutant
6. Domain d2al4f1: 2al4 F:4-261 [126963]
  automatically matched to d1mm6a_
  complexed with cx6, qus, zn; mutant
Domain(s) for 2al5:
1. Domain d2al5a1: 2al5 A:3-261 [126964]
  automatically matched to d1mm6a_
  complexed with 4mp, fwd; mutant
2. Domain d2al5b1: 2al5 B:3-261 [126965]
  automatically matched to d1mm6a_
  complexed with 4mp, fwd; mutant
Domain(s) for 2anj:
- Domain d2anja1: 2anj A:3-117,A:120-262 [127054]
  complexed with kai; mutant
Domain(s) for 2cmo:
1. Domain d2cmoa1: 2cmo A:5-261 [130630]
  automatically matched to d1mm6a_
  complexed with glu, m1l, so4
2. Domain d2cmob1: 2cmo B:5-261 [130631]
  automatically matched to d1mm6a_
  complexed with glu, m1l, so4
Domain(s) for 2p2a:
1. Domain d2p2aa1: 2p2a A:0-258 [139461]
  automatically matched to d1mm6a_
  complexed with glu, mp9, so4
2. Domain d2p2ab1: 2p2a B:1-258 [139462]
  automatically matched to d1mm6a_
  complexed with glu, mp9, so4

More info for Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core

Timeline for Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core:

Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core first appeared (with stable ids) in SCOP 1.55, called Species Rat (Rattus norvegicus) [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core (GluR2)
Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core appears in SCOP 1.71
Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core appears in SCOP 1.75
Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core appears in the current release, SCOPe 2.08, called Species Norway rat (Rattus norvegicus), GluR2 [TaxId:10116] from c.94.1.1 Glutamate receptor ligand binding core