SCOPe 2.08: Domain d4x7db1: 4x7d B:225-530

Lineage for d4x7db1 (4x7d B:225-530)

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)
Family b.121.4.0: automated matches [191569] (1 protein)
not a true family
Protein automated matches [190988] (51 species)
not a true protein
Species Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId:1241973] [419916] (10 PDB entries)
Domain d4x7db1: 4x7d B:225-530 [409638]
Other proteins in same PDB: d4x7da2, d4x7db2, d4x7dc_, d4x7dd1, d4x7dd2
automated match to d5or7a_
complexed with edo

Details for d4x7db1

PDB Entry: 4x7d (more details), 2.15 Å

PDB Description: crystal structure of 2012 nsw gii.4 p domain in complex with nano-85

PDB Compounds: (B:) vp1

SCOPe Domain Sequences for d4x7db1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4x7db1 b.121.4.0 (B:225-530) automated matches {Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId: 1241973]}
kpfsvpvltveemtnsrfpipleklftgpssafvvqpqngrcttdgvllgttqlspvnic
tfrgdvthitgsrnytmnlasqnwndydpteeipaplgtpdfvgkiqgvltqttrtdgst
rghkatvytgsadfapklgrvqfetdtdrdfeanqntkftpvgviqdggtthrnepqqwv
lpsysgrnthnvhlapavaptfpgeqllffrstmpgcsgypnmdldcllpqewvqyfyqe
aapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvnqf
ytlapm

SCOPe Domain Coordinates for d4x7db1:

Click to download the PDB-style file with coordinates for d4x7db1.
(The format of our PDB-style files is described here.)

Timeline for d4x7db1: