Lineage for d4rgmh_ (4rgm H:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2744177Species Mouse (Mus musculus) [TaxId:10090] [186842] (622 PDB entries)
  8. 2745187Domain d4rgmh_: 4rgm H: [409546]
    Other proteins in same PDB: d4rgma1, d4rgma2, d4rgmb1, d4rgmb2, d4rgml1, d4rgml2, d4rgms1, d4rgms2
    automated match to d6shgh_

Details for d4rgmh_

PDB Entry: 4rgm (more details), 2.69 Å

PDB Description: structure of staphylococcal enterotoxin b bound to the neutralizing antibody 20b1
PDB Compounds: (H:) 20B1 heavy chain

SCOPe Domain Sequences for d4rgmh_:

Sequence, based on SEQRES records: (download)

>d4rgmh_ b.1.1.1 (H:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
qiqlvqsgpelkkpgetvrisckasgyiftiagiqwvqkmpgrglrwigwinthsgvpey
aeefkgrfafsletsartaylqisnlkdedtatyfcariyygnnggvmdywgqgtsvtvs
sakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqs
dlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprd

Sequence, based on observed residues (ATOM records): (download)

>d4rgmh_ b.1.1.1 (H:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
qiqlvqsgpelkkpgetvrisckasgyiftiagiqwvqkmpgrglrwigwinthsgvpey
aeefkgrfafsletsartaylqisnlkdedtatyfcariyygnnggvmdywgqgtsvtvs
sakttppsvyplapnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytls
ssvtvpsstwpsetvtcnvahpasstkvdkkivprd

SCOPe Domain Coordinates for d4rgmh_:

Click to download the PDB-style file with coordinates for d4rgmh_.
(The format of our PDB-style files is described here.)

Timeline for d4rgmh_:

  • d4rgmh_ is new in SCOPe 2.08-stable