SCOPe 2.08: Domain d6s8cb1: 6s8c B:2-302

Lineage for d6s8cb1 (6s8c B:2-302)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
   2 intertwined domains; all-beta and alpha+beta

4. Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (2 families)

5. Family f.10.1.0: automated matches [227258] (1 protein)
   not a true family

6. Protein automated matches [227047] (11 species)
   not a true protein

7. Species Tick-borne encephalitis virus [TaxId:11084] [385818] (1 PDB entry)

8. Domain d6s8cb1: 6s8c B:2-302 [385819]
   Other proteins in same PDB: d6s8ca1, d6s8cb2, d6s8cc1
   automated match to d4gsxa1

Details for d6s8cb1

PDB Entry: 6s8c, 2.57 Å

PDB Description: post-fusion conformation of the envelope protein of tick-borne encephalitis virus with longer stem

PDB Compounds: (B:) Genome polyprotein,Genome polyprotein

SCOPe Domain Sequences for d6s8cb1:

Sequence, based on SEQRES records:

>d6s8cb1 f.10.1.0 (B:2-302) automated matches {Tick-borne encephalitis virus [TaxId: 11084]}
rcthlenrdfvtgtqgttrvtlvlelggcvtitaegkpsmdvwldaiyqenpaktreycl
haklsdtkvaarcptmgpatlaeehqggtvckrdqsdrghgnhcglfgkgsivacvkaac
eakkkatghvydankivytvkvephtgdyvaanethsgrktasftissektiltmgeygd
vsllcrvasgvdlaqtvileldktvehlptawqvhrdwfndlalpwkhegaqnwnnaerl
vefgaphavkmdvynlgdqtgvllkalagvpvahiegtkyhlksghvtcevgleklkmkg
l

Sequence, based on observed residues (ATOM records):

>d6s8cb1 f.10.1.0 (B:2-302) automated matches {Tick-borne encephalitis virus [TaxId: 11084]}
rcthlenrdfvtgtqgttrvtlvlelggcvtitaegkpsmdvwldaiyqenpaktreycl
haklsdtkehqggtvckacvkaaceakkkatghvydankivytvkvephrktasftisse
ktiltmgeygdvsllcrvasgvdlaqtvileldptawqvhrdwfndlalpwkhegaqnwn
naerlvefgaphavkmdvynlgdqtgvllkalagvpvahiegtkyhlksghvtcevglek
lkmkgl

Timeline for d6s8cb1:

• d6s8cb1 first appeared in SCOPe 2.07