Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2576583Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
    2 intertwined domains; all-beta and alpha+beta
  4. 2576584Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (2 families) (S)
  5. 2576629Family f.10.1.0: automated matches [227258] (1 protein)
    not a true family
  6. 2576630Protein automated matches [227047] (8 species)
    not a true protein

Species:

  1. 2576631Chikungunya virus [TaxId:37124] [226026] (2 PDB entries)
    1. Domain for 3n43:
    2. Domain for 3n44:
  2. 2576634Dengue virus 1 [TaxId:11059] [226543] (2 PDB entries)
    1. Domains for 4gsx:
      1. 2576635Domain d4gsxa1: 4gsx A:2-297 [222123]
        Other proteins in same PDB: d4gsxa2, d4gsxb2
        automated match to d1urza2
        complexed with cd, cl, nag
      2. 2576636Domain d4gsxb1: 4gsx B:2-297 [222125]
        Other proteins in same PDB: d4gsxa2, d4gsxb2
        automated match to d1urza2
        complexed with cd, cl, nag
    2. Domains for 4gt0:
      1. 2576637Domain d4gt0a1: 4gt0 A:2-297 [222131]
        Other proteins in same PDB: d4gt0a2, d4gt0b2
        automated match to d1urza2
        complexed with cd, cl, nag
      2. 2576638Domain d4gt0b1: 4gt0 B:2-297 [222133]
        Other proteins in same PDB: d4gt0a2, d4gt0b2
        automated match to d1urza2
        complexed with cd, cl, nag
  3. 2576639Dengue virus 2 [TaxId:11060] [268948] (2 PDB entries)
    1. Domains for 4uta:
      1. 2576640Domain d4utaa1: 4uta A:1-297 [268956]
        Other proteins in same PDB: d4utaa2, d4utaa3, d4utab2, d4utab3, d4utal1, d4utal2, d4utam1, d4utam2
        automated match to d4gsxa1
      2. 2576641Domain d4utab1: 4uta B:1-297 [268958]
        Other proteins in same PDB: d4utaa2, d4utaa3, d4utab2, d4utab3, d4utal1, d4utal2, d4utam1, d4utam2
        automated match to d4gsxa1
    2. Domains for 4utc:
      1. 2576642Domain d4utca1: 4utc A:1-297 [268952]
        Other proteins in same PDB: d4utca2, d4utca3, d4utcb2, d4utcb3
        automated match to d4gsxa1
      2. 2576643Domain d4utcb1: 4utc B:1-297 [268949]
        Other proteins in same PDB: d4utca2, d4utca3, d4utcb2, d4utcb3
        automated match to d4gsxa1
  4. 2576644Japanese encephalitis virus [TaxId:11072] [226036] (1 PDB entry)
  5. 2576646West Nile virus [TaxId:11082] [255208] (2 PDB entries)
    1. Domain for 2hg0:
    2. Domain for 2i69:
  6. 2576649Zika virus [TaxId:64320] [317278] (5 PDB entries)
    1. Domains for 5gzn:
      1. 2576656Domain d5gzna1: 5gzn A:1-303 [327657]
        Other proteins in same PDB: d5gzna2, d5gznb2, d5gznd1, d5gznd2, d5gznl1, d5gznl2
        automated match to d4gsxa1
      2. 2576657Domain d5gznb1: 5gzn B:1-303 [327600]
        Other proteins in same PDB: d5gzna2, d5gznb2, d5gznd1, d5gznd2, d5gznl1, d5gznl2
        automated match to d4gsxa1
    2. Domains for 5gzo:
      1. 2576654Domain d5gzoa1: 5gzo A:1-303 [328459]
        Other proteins in same PDB: d5gzoa2, d5gzob2, d5gzod1, d5gzod2, d5gzol1, d5gzol2
        automated match to d4gsxa1
      2. 2576655Domain d5gzob1: 5gzo B:1-303 [328585]
        Other proteins in same PDB: d5gzoa2, d5gzob2, d5gzod1, d5gzod2, d5gzol1, d5gzol2
        automated match to d4gsxa1
    3. Domain for 5jhl:
    4. Domains for 5jhm:
      1. 2576650Domain d5jhma1: 5jhm A:1-303 [317287]
        Other proteins in same PDB: d5jhma2, d5jhmb2
        automated match to d4gsxa1
      2. 2576651Domain d5jhmb1: 5jhm B:1-303 [317317]
        Other proteins in same PDB: d5jhma2, d5jhmb2
        automated match to d4gsxa1
    5. Domains for 5lbv:
      1. 2576652Domain d5lbva1: 5lbv A:1-303 [319446]
        Other proteins in same PDB: d5lbva2, d5lbvb2
        automated match to d4gsxa1
        complexed with bma, fuc, man, na, nag
      2. 2576653Domain d5lbvb1: 5lbv B:1-303 [319380]
        Other proteins in same PDB: d5lbva2, d5lbvb2
        automated match to d4gsxa1
        complexed with bma, fuc, man, na, nag
  7. 3052445Japanese encephalitis virus (strain sa-14) [TaxId:11073] [352507] (2 PDB entries)
    1. Domain for 5mv1:
    2. Domain for 5mv2:
  8. 3059469Yellow fever virus [TaxId:11089] [359531] (1 PDB entry)

More info for Protein automated matches from f.10.1.0: automated matches

Timeline for Protein automated matches from f.10.1.0: automated matches: