Lineage for d5l5dh_ (5l5d H:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2988339Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2988340Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2988529Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2993312Protein automated matches [190144] (14 species)
    not a true protein
  7. 2993581Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189752] (202 PDB entries)
  8. 2994709Domain d5l5dh_: 5l5d H: [325271]
    Other proteins in same PDB: d5l5da_, d5l5db_, d5l5dc1, d5l5dc2, d5l5dd_, d5l5de_, d5l5df_, d5l5dg_, d5l5di_, d5l5dj_, d5l5dk_, d5l5dl_, d5l5dm_, d5l5dn_, d5l5do_, d5l5dp_, d5l5dq1, d5l5dq2, d5l5dr_, d5l5ds_, d5l5dt_, d5l5du_, d5l5dw_, d5l5dx_, d5l5dy_, d5l5dz_
    automated match to d4r17h_
    complexed with 04c, cl, mes, mg

Details for d5l5dh_

PDB Entry: 5l5d (more details), 2.8 Å

PDB Description: yeast 20s proteasome with human beta5i (1-138) and human beta6 (97- 111; 118-133) in complex with onx 0914
PDB Compounds: (H:) Proteasome subunit beta type-2

SCOPe Domain Sequences for d5l5dh_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5l5dh_ d.153.1.4 (H:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
ttivgvkfnngvviaadtrstqgpivadkncaklhrispkiwcagagtaadteavtqlig
snielhslytsreprvvsalqmlkqhlfkyqghigaylivagvdptgshlfsihahgstd
vgyylslgsgslaamavleshwkqdltkeeaiklasdaiqagiwndlgsgsnvdvcvmei
gkdaeylrnyltpnvreekqksykfprgttavlkesivnicdiqee

SCOPe Domain Coordinates for d5l5dh_:

Click to download the PDB-style file with coordinates for d5l5dh_.
(The format of our PDB-style files is described here.)

Timeline for d5l5dh_: