Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1508295Fold a.211: HD-domain/PDEase-like [109603] (1 superfamily)
    multihelical; consists of two different alpha-helical bundles
  4. 1508296Superfamily a.211.1: HD-domain/PDEase-like [109604] (6 families) (S)
  5. 1508691Family a.211.1.0: automated matches [191566] (1 protein)
    not a true family
  6. 1508692Protein automated matches [190983] (6 species)
    not a true protein

Species:

  1. 1508693Human (Homo sapiens) [TaxId:9606] [188676] (56 PDB entries)
    1. Domain for 1zkl:
    2. Domains for 2oun:
      1. 1508702Domain d2ouna_: 2oun A: [231106]
        automated match to d3wi2a_
        complexed with amp, mg, zn
      2. 1508703Domain d2ounb_: 2oun B: [238790]
        automated match to d2ouna_
        complexed with amp, mg, zn
    3. Domains for 2oup:
      1. 1508700Domain d2oupa_: 2oup A: [243382]
        automated match to d2ouna_
        complexed with mg, zn
      2. 1508701Domain d2oupb_: 2oup B: [243383]
        automated match to d2ouna_
        complexed with mg, zn
    4. Domains for 2ouq:
      1. 1508729Domain d2ouqa_: 2ouq A: [243384]
        automated match to d2ouna_
        complexed with 5gp, mg, zn
      2. 1508730Domain d2ouqb_: 2ouq B: [243385]
        automated match to d2ouna_
        complexed with 5gp, mg, zn
    5. Domains for 2our:
      1. 1508696Domain d2oura_: 2our A: [231107]
        automated match to d3wi2a_
        complexed with cmp, mg; mutant
      2. 1508697Domain d2ourb_: 2our B: [231108]
        automated match to d3wi2a_
        complexed with cmp, mg; mutant
    6. Domains for 2ous:
      1. 1508694Domain d2ousa_: 2ous A: [243386]
        automated match to d2ourb_
        complexed with mg; mutant
      2. 1508695Domain d2ousb_: 2ous B: [243387]
        automated match to d2ourb_
        complexed with mg; mutant
    7. Domains for 2ouu:
      1. 1508698Domain d2ouua_: 2ouu A: [243388]
        automated match to d2ourb_
        complexed with 35g, mg; mutant
      2. 1508699Domain d2ouub_: 2ouu B: [243389]
        automated match to d2ourb_
        complexed with 35g, mg; mutant
    8. Domains for 2ouv:
      1. 1508704Domain d2ouva_: 2ouv A: [231109]
        automated match to d3wi2a_
        complexed with mg, zn; mutant
      2. 1508705Domain d2ouvb_: 2ouv B: [238791]
        automated match to d2ouva_
        complexed with mg, zn; mutant
    9. Domains for 2ouy:
      1. 1508731Domain d2ouya_: 2ouy A: [243390]
        automated match to d2ouva_
        complexed with cmp, mg, zn; mutant
      2. 1508732Domain d2ouyb_: 2ouy B: [243391]
        automated match to d2ouva_
        complexed with cmp, mg, zn; mutant
    10. Domains for 2wey:
      1. 1508794Domain d2weya_: 2wey A: [231395]
        automated match to d3wi2a_
        complexed with ev1, mg, zn
      2. 1508795Domain d2weyb_: 2wey B: [231396]
        automated match to d3wi2a_
        complexed with ev1, mg, zn
    11. Domains for 2y0j:
      1. 1508771Domain d2y0ja_: 2y0j A: [231590]
        automated match to d3wi2a_
        complexed with axc, mg, zn
      2. 1508772Domain d2y0jb_: 2y0j B: [231589]
        automated match to d3wi2a_
        complexed with axc, mg, zn
    12. Domain for 3ecm:
    13. Domains for 3ecn:
      1. 1508748Domain d3ecna_: 3ecn A: [174831]
        automated match to d1q9mc_
        complexed with ibm, mg, zn
      2. 1508749Domain d3ecnb_: 3ecn B: [174832]
        automated match to d1q9mc_
        complexed with ibm, mg, zn
    14. Domain for 3g3n:
    15. Domains for 3sn7:
      1. 1508736Domain d3sn7a_: 3sn7 A: [233566]
        automated match to d3wi2a_
        complexed with 540, cl, mg, zn
      2. 1508737Domain d3sn7b_: 3sn7 B: [233565]
        automated match to d3wi2a_
        complexed with 540, cl, mg, zn
    16. Domains for 3sni:
      1. 1508746Domain d3snia_: 3sni A: [233568]
        automated match to d3wi2a_
        complexed with 546, cl, mg, zn
      2. 1508747Domain d3snib_: 3sni B: [233567]
        automated match to d3wi2a_
        complexed with 546, cl, mg, zn
    17. Domains for 3snl:
      1. 1508777Domain d3snla_: 3snl A: [233569]
        automated match to d3wi2a_
        complexed with 548, mg, zn
      2. 1508778Domain d3snlb_: 3snl B: [233570]
        automated match to d3wi2a_
        complexed with 548, mg, zn
    18. Domains for 3ui7:
      1. 1508761Domain d3ui7a_: 3ui7 A: [233789]
        automated match to d3wi2a_
        complexed with c1l, mg, zn
      2. 1508762Domain d3ui7b_: 3ui7 B: [233790]
        automated match to d3wi2a_
        complexed with c1l, mg, zn
    19. Domains for 3uuo:
      1. 1508742Domain d3uuoa_: 3uuo A: [233803]
        automated match to d3wi2a_
        complexed with 0cv, mg, po4, zn
      2. 1508743Domain d3uuob_: 3uuo B: [233804]
        automated match to d3wi2a_
        complexed with 0cv, mg, po4, zn
    20. Domains for 3wi2:
      1. 1508792Domain d3wi2a_: 3wi2 A: [229748]
        automated match to d3b2ra_
        complexed with mg, p98, zn
      2. 1508793Domain d3wi2b_: 3wi2 B: [233962]
        automated match to d3wi2a_
        complexed with mg, p98, zn
    21. Domains for 3ws8:
      1. 1508796Domain d3ws8a_: 3ws8 A: [256519]
        automated match to d2ourb_
        complexed with mg, x4c, zn
      2. 1508797Domain d3ws8b_: 3ws8 B: [256518]
        automated match to d2ourb_
        complexed with mg, x4c, zn
    22. Domains for 3ws9:
      1. 1508798Domain d3ws9a_: 3ws9 A: [256520]
        automated match to d2ourb_
        complexed with mg, x4d, zn
      2. 1508799Domain d3ws9b_: 3ws9 B: [256521]
        automated match to d2ourb_
        complexed with mg, x4d, zn
    23. Domain for 3wym:
    24. Domains for 4ael:
      1. 1508750Domain d4aela_: 4ael A: [234060]
        automated match to d3wi2a_
        complexed with 4hn, mg, zn
      2. 1508751Domain d4aelb_: 4ael B: [234061]
        automated match to d3wi2a_
        complexed with 4hn, mg, zn
    25. Domains for 4ajd:
      1. 1508757Domain d4ajda_: 4ajd A: [234071]
        automated match to d3wi2a_
        complexed with f04, mg, zn
      2. 1508758Domain d4ajdd_: 4ajd D: [239972]
        automated match to d4ajda_
        complexed with f04, mg, zn
    26. Domains for 4ajf:
      1. 1508738Domain d4ajfa_: 4ajf A: [251044]
        automated match to d4ajda_
        complexed with f03, mg, zn
      2. 1508739Domain d4ajfd_: 4ajf D: [251045]
        automated match to d4ajda_
        complexed with f03, mg, zn
    27. Domains for 4ajg:
      1. 1508769Domain d4ajga_: 4ajg A: [251046]
        automated match to d4ajda_
        complexed with f07, mg, zn
      2. 1508770Domain d4ajgd_: 4ajg D: [251047]
        automated match to d4ajda_
        complexed with f07, mg, zn
    28. Domains for 4ajm:
      1. 1508765Domain d4ajma_: 4ajm A: [251048]
        automated match to d4ajda_
        complexed with 3a6, mg, zn
      2. 1508766Domain d4ajmd_: 4ajm D: [251049]
        automated match to d4ajda_
        complexed with 3a6, mg, zn
    29. Domain for 4bbx:
    30. Domains for 4c1i:
      1. 1508786Domain d4c1ia_: 4c1i A: [259153]
        automated match to d3b2ra_
        complexed with eh9, mg, zn
      2. 1508787Domain d4c1ib_: 4c1i B: [259154]
        automated match to d3b2ra_
        complexed with eh9, mg, zn
      3. 1508788Domain d4c1ic_: 4c1i C: [259152]
        automated match to d3b2ra_
        complexed with eh9, mg, zn
      4. 1508789Domain d4c1id_: 4c1i D: [259155]
        automated match to d3b2ra_
        complexed with eh9, mg, zn
    31. Domains for 4d09:
      1. 1508790Domain d4d09c_: 4d09 C: [259756]
        automated match to d3b2ra_
        complexed with 788, mg, zn
      2. 1508791Domain d4d09d_: 4d09 D: [258661]
        automated match to d3b2ra_
        complexed with 788, mg, zn
    32. Domains for 4ddl:
      1. 1508727Domain d4ddla_: 4ddl A: [234310]
        automated match to d3wi2a_
        complexed with 0jq, so4, zn
      2. 1508728Domain d4ddlb_: 4ddl B: [234311]
        automated match to d3wi2a_
        complexed with 0jq, so4, zn
    33. Domains for 4dff:
      1. 1508734Domain d4dffa_: 4dff A: [234312]
        automated match to d3wi2a_
        complexed with 0jp, mg, zn
      2. 1508735Domain d4dffb_: 4dff B: [234313]
        automated match to d3wi2a_
        complexed with 0jp, mg, zn
    34. Domains for 4fcb:
      1. 1508763Domain d4fcba_: 4fcb A: [234412]
        automated match to d3wi2a_
        complexed with 0t7, mg, zn
      2. 1508764Domain d4fcbb_: 4fcb B: [234413]
        automated match to d3wi2a_
        complexed with 0t7, mg, zn
    35. Domains for 4fcd:
      1. 1508755Domain d4fcda_: 4fcd A: [234419]
        automated match to d3wi2a_
        complexed with 0t6, mg, zn
      2. 1508756Domain d4fcdb_: 4fcd B: [234416]
        automated match to d3wi2a_
        complexed with 0t6, mg, zn
    36. Domains for 4heu:
      1. 1508723Domain d4heua_: 4heu A: [234645]
        automated match to d3wi2a_
        complexed with 15j, so4, zn
      2. 1508724Domain d4heub_: 4heu B: [234646]
        automated match to d3wi2a_
        complexed with 15j, so4, zn
    37. Domains for 4hf4:
      1. 1508717Domain d4hf4a_: 4hf4 A: [252422]
        automated match to d4heua_
        complexed with 15h, gol, so4, zn
      2. 1508718Domain d4hf4b_: 4hf4 B: [252423]
        automated match to d4heua_
        complexed with 15h, gol, so4, zn
    38. Domains for 4lkq:
      1. 1508719Domain d4lkqa_: 4lkq A: [237973]
        automated match to d4lkqb_
        complexed with 1xm, ni
      2. 1508720Domain d4lkqb_: 4lkq B: [237198]
        automated match to d3wi2a_
        complexed with 1xm, ni
    39. Domains for 4llj:
      1. 1508715Domain d4llja_: 4llj A: [237984]
        automated match to d4lkqb_
        complexed with 1xn, ni
      2. 1508716Domain d4lljb_: 4llj B: [237980]
        automated match to d4lkqb_
        complexed with 1xn, ni
    40. Domains for 4llk:
      1. 1508711Domain d4llka_: 4llk A: [237985]
        automated match to d4lkqb_
        complexed with mew, ni
      2. 1508712Domain d4llkb_: 4llk B: [237986]
        automated match to d4lkqb_
        complexed with mew, ni
    41. Domains for 4llp:
      1. 1508744Domain d4llpa_: 4llp A: [237975]
        automated match to d4lkqb_
        complexed with 4ze, ni
      2. 1508745Domain d4llpb_: 4llp B: [237976]
        automated match to d4lkqb_
        complexed with 4ze, ni
    42. Domains for 4llx:
      1. 1508740Domain d4llxa_: 4llx A: [237977]
        automated match to d4lkqb_
        complexed with 5ze, ni
      2. 1508741Domain d4llxb_: 4llx B: [237983]
        automated match to d4lkqb_
        complexed with 5ze, ni
    43. Domains for 4lm0:
      1. 1508725Domain d4lm0a_: 4lm0 A: [238000]
        automated match to d4lkqb_
        complexed with 5ni, ni
      2. 1508726Domain d4lm0b_: 4lm0 B: [238001]
        automated match to d4lkqb_
        complexed with 5ni, ni
    44. Domains for 4lm1:
      1. 1508721Domain d4lm1a_: 4lm1 A: [237999]
        automated match to d4lkqb_
        complexed with 7ze, ni
      2. 1508722Domain d4lm1b_: 4lm1 B: [238002]
        automated match to d4lkqb_
        complexed with 7ze, ni
    45. Domains for 4lm2:
      1. 1508713Domain d4lm2a_: 4lm2 A: [237997]
        automated match to d4lkqb_
        complexed with 8ze, ni
      2. 1508714Domain d4lm2b_: 4lm2 B: [237998]
        automated match to d4lkqb_
        complexed with 8ze, ni
    46. Domains for 4lm3:
      1. 1508709Domain d4lm3a_: 4lm3 A: [237987]
        automated match to d4lkqb_
        complexed with 9ze, edo, ni
      2. 1508710Domain d4lm3b_: 4lm3 B: [237989]
        automated match to d4lkqb_
        complexed with 9ze, edo, ni
    47. Domains for 4lm4:
      1. 1508707Domain d4lm4a_: 4lm4 A: [237993]
        automated match to d4lkqb_
        complexed with jpz, ni
      2. 1508708Domain d4lm4b_: 4lm4 B: [237996]
        automated match to d4lkqb_
        complexed with jpz, ni
    48. Domain for 4mrw:
    49. Domains for 4muw:
      1. 1508784Domain d4muwa_: 4muw A: [235689]
        automated match to d3wi2a_
        complexed with 2f4, gol, so4, zn
      2. 1508785Domain d4muwb_: 4muw B: [235688]
        automated match to d3wi2a_
        complexed with 2f4, gol, so4, zn
    50. Domains for 4mvh:
      1. 1508773Domain d4mvha_: 4mvh A: [236064]
        automated match to d4muwa_
        complexed with 2f5, so4, zn
      2. 1508774Domain d4mvhb_: 4mvh B: [236065]
        automated match to d4muwa_
        complexed with 2f5, so4, zn
    51. Domains for 4p0n:
      1. 1508752Domain d4p0na_: 4p0n A: [259896]
        automated match to d4lm1a_
        complexed with 1ir, 1is, gol, so4, zn
      2. 1508753Domain d4p0nb_: 4p0n B: [259895]
        automated match to d4lm1a_
        complexed with 1ir, 1is, gol, so4, zn
    52. Domain for 4p1r:
    53. Domains for 4phw:
      1. 1508775Domain d4phwa_: 4phw A: [258731]
        automated match to d2ourb_
        complexed with 2w1, so4, zn
      2. 1508776Domain d4phwb_: 4phw B: [258730]
        automated match to d2ourb_
        complexed with 2w1, so4, zn
    54. Domain for 4pm0:
    55. Domains for 4tpm:
      1. 1508780Domain d4tpma_: 4tpm A: [261987]
        automated match to d2ourb_
        complexed with 35e, gol, so4, zn
      2. 1508781Domain d4tpmb_: 4tpm B: [261986]
        automated match to d2ourb_
        complexed with 35e, gol, so4, zn
    56. Domains for 4tpp:
      1. 1508782Domain d4tppa_: 4tpp A: [261982]
        automated match to d2ourb_
        complexed with 35d, gol, so4, zn
      2. 1508783Domain d4tppb_: 4tpp B: [261983]
        automated match to d2ourb_
        complexed with 35d, gol, so4, zn
  2. 1508800Leishmania major [TaxId:5664] [255578] (1 PDB entry)
  3. 1508803Norway rat (Rattus norvegicus) [TaxId:10116] [255521] (11 PDB entries)
    1. Domain for 2o8h:
    2. Domain for 2ovv:
    3. Domain for 2ovy:
    4. Domain for 3hqw:
    5. Domain for 3hqy:
    6. Domain for 3hqz:
    7. Domain for 3hr1:
    8. Domain for 3lxg:
    9. Domain for 3qpn:
    10. Domain for 3qpo:
    11. Domain for 3qpp:
  4. 1508815Shewanella amazonensis [TaxId:326297] [189692] (1 PDB entry)
  5. 1508817Trypanosoma cruzi [TaxId:5693] [226313] (2 PDB entries)
    1. Domains for 3v93:
      1. 1508818Domain d3v93a_: 3v93 A: [217705]
        automated match to d2chma1
        complexed with mg, zn
      2. 1508819Domain d3v93b_: 3v93 B: [217706]
        automated match to d2chma1
        complexed with mg, zn
      3. 1508820Domain d3v93c_: 3v93 C: [217707]
        automated match to d2chma1
        complexed with mg, zn
      4. 1508821Domain d3v93d_: 3v93 D: [217708]
        automated match to d2chma1
        complexed with mg, zn
      5. 1508822Domain d3v93e_: 3v93 E: [217709]
        automated match to d2chma1
        complexed with mg, zn
      6. 1508823Domain d3v93f_: 3v93 F: [217710]
        automated match to d2chma1
        complexed with mg, zn
      7. 1508824Domain d3v93g_: 3v93 G: [217711]
        automated match to d2chma1
        complexed with mg, zn
      8. 1508825Domain d3v93h_: 3v93 H: [217712]
        automated match to d2chma1
        complexed with mg, zn
    2. Domains for 3v94:
      1. 1508826Domain d3v94a_: 3v94 A: [217713]
        automated match to d2chma1
        complexed with mg, wyq, zn
      2. 1508827Domain d3v94b_: 3v94 B: [217714]
        automated match to d2chma1
        complexed with mg, wyq, zn
      3. 1508828Domain d3v94c_: 3v94 C: [217715]
        automated match to d2chma1
        complexed with mg, wyq, zn
      4. 1508829Domain d3v94d_: 3v94 D: [217716]
        automated match to d2chma1
        complexed with mg, wyq, zn
      5. 1508830Domain d3v94e_: 3v94 E: [217717]
        automated match to d2chma1
        complexed with mg, wyq, zn
      6. 1508831Domain d3v94f_: 3v94 F: [217718]
        automated match to d2chma1
        complexed with mg, wyq, zn
      7. 1508832Domain d3v94g_: 3v94 G: [217719]
        automated match to d2chma1
        complexed with mg, wyq, zn
      8. 1508833Domain d3v94h_: 3v94 H: [217720]
        automated match to d2chma1
        complexed with mg, wyq, zn
  6. 1508834Trypanosome (Trypanosoma brucei) [TaxId:5691] [234760] (1 PDB entry)

More info for Protein automated matches from a.211.1.0: automated matches

Timeline for Protein automated matches from a.211.1.0: automated matches: