SCOPe 2.01: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.01
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.108: HAD-like [56783] (1 superfamily)
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
Superfamily c.108.1: HAD-like [56784] (26 families)
usually contains an insertion (sub)domain after strand 1
Family c.108.1.8: 5'(3')-deoxyribonucleotidase (dNT-2) [82382] (2 proteins)
the insertion subdomain is a 4-helical bundle; dephosphorylates dUMP and dTMP
Protein automated matches [190171] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [186899] (9 PDB entries)
1. Domain for 1z4j:
  - Domain d1z4ja_: 1z4j A: [124434]
    automated match to d1q92a_
    complexed with gol, mg, u2p
2. Domain for 1z4k:
  - Domain d1z4ka_: 1z4k A: [124435]
    automated match to d1q92a_
    complexed with mg, t3p
3. Domain for 1z4l:
  - Domain d1z4la_: 1z4l A: [124436]
    automated match to d1q92a_
    complexed with mg, tmp
4. Domain for 1z4m:
  - Domain d1z4ma_: 1z4m A: [124437]
    automated match to d1q92a_
    complexed with gol, mg, u5p
5. Domain for 1z4p:
  - Domain d1z4px_: 1z4p X: [124442]
    automated match to d1q92a_
    complexed with dgp, mg
6. Domain for 1z4q:
  - Domain d1z4qa_: 1z4q A: [124443]
    automated match to d1q92a_
    complexed with d4m, mg
7. Domains for 2i7d:
  1. Domain d2i7da_: 2i7d A: [165420]
    automated match to d1mh9a_
    complexed with alf, dur, mg
  2. Domain d2i7db_: 2i7d B: [165421]
    automated match to d1mh9a_
    complexed with alf, dur, mg
8. Domain for 2jau:
  - Domain d2jaua_: 2jau A: [147952]
    automated match to d1q92a_
    complexed with atm, mg, po4
9. Domain for 2jaw:
  - Domain d2jawa_: 2jaw A: [147953]
    automated match to d1q92a_
    complexed with bvp, mg
Mouse (Mus musculus) [TaxId:10090] [188278] (2 PDB entries)
1. Domain for 2jao:
  - Domain d2jaoa_: 2jao A: [165965]
    automated match to d1z4ia1
    complexed with dgp, gol, mg
2. Domain for 2jar:
  - Domain d2jara_: 2jar A: [165968]
    automated match to d1z4ia1
    complexed with mg, ump

More info for Protein automated matches from c.108.1.8: 5'(3')-deoxyribonucleotidase (dNT-2)

Timeline for Protein automated matches from c.108.1.8: 5'(3')-deoxyribonucleotidase (dNT-2):

Protein automated matches from c.108.1.8: 5'(3')-deoxyribonucleotidase (dNT-2) is new in SCOPe 2.01-stable
Protein automated matches from c.108.1.8: 5'(3')-deoxyribonucleotidase (dNT-2) appears in SCOPe 2.02
Protein automated matches from c.108.1.8: 5'(3')-deoxyribonucleotidase (dNT-2) appears in the current release, SCOPe 2.08