SCOPe 2.06: Domain d2xyma_: 2xym A:

Lineage for d2xyma_ (2xym A:)

1. Root: SCOPe 2.06

2. Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

6. Protein automated matches [190260] (29 species)
   not a true protein

7. Species Hepatitis C virus [TaxId:356411] [189609] (1 PDB entry)

8. Domain d2xyma_: 2xym A: [170486]
   automated match to d1nb4a_
   complexed with po4; mutant

Details for d2xyma_

PDB Entry: 2xym, 1.77 Å

PDB Description: hcv-jfh1 ns5b t385a mutant

PDB Compounds: (A:) RNA-directed RNA polymerase

SCOPe Domain Sequences for d2xyma_:

Sequence; same for both SEQRES and ATOM records:

>d2xyma_ e.8.1.4 (A:) automated matches {Hepatitis C virus [TaxId: 356411]}
smsyswtgalitpcspeeeklpinplsnsllryhnkvycttsksasqrakkvtfdrtqvl
dahydsvlkdiklaaskvsarlltleeacqltpphsarskygfgakevrslsgravnhik
svwkdlledpqtpipttimaknevfcvdpakggkkparlivypdlgvrvcekmalyditq
klpqavmgasygfqyspaqrveyllkawaekkdpmgfsydtrcfdstvterdirteesiy
qacslpeeartaihslterlyvggpmfnskgqtcgyrrcrasgvlttsmgntitcyvkal
aackaagivaptmlvcgddlvvisesqgteedernlrafteamtrysappgdpprpeydl
elitscssnvsvalgprgrrryylardpttplaraawetvrhspinswlgniiqyaptiw
vrmvlmthffsilmvqdtldqnlnfemygsvysvnpldlpaiierlhgldafsmhtyshh
eltrvasalrklgapplrvwksraravraslisrggkaavcgrylfnwavktklkltplp
earlldlsswftvgagggdifhs

Timeline for d2xyma_:

• d2xyma_ first appeared in SCOPe 2.01
  
• d2xyma_ appears in SCOPe 2.05
  
• d2xyma_ appears in SCOPe 2.07
  
• d2xyma_ appears in the current release, SCOPe 2.08