Lineage for d2xyma_ (2xym A:)

  1. Root: SCOPe 2.07
  2. 2618030Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2622069Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2622070Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2623022Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 2623336Protein automated matches [190260] (25 species)
    not a true protein
  7. 2623423Species Hepatitis C virus genotype 2a (isolate jfh-1) [TaxId:356411] [189047] (4 PDB entries)
  8. 2623424Domain d2xyma_: 2xym A: [170486]
    automated match to d1nb4a_
    complexed with po4; mutant

Details for d2xyma_

PDB Entry: 2xym (more details), 1.77 Å

PDB Description: hcv-jfh1 ns5b t385a mutant
PDB Compounds: (A:) RNA-directed RNA polymerase

SCOPe Domain Sequences for d2xyma_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2xyma_ e.8.1.4 (A:) automated matches {Hepatitis C virus genotype 2a (isolate jfh-1) [TaxId: 356411]}
smsyswtgalitpcspeeeklpinplsnsllryhnkvycttsksasqrakkvtfdrtqvl
dahydsvlkdiklaaskvsarlltleeacqltpphsarskygfgakevrslsgravnhik
svwkdlledpqtpipttimaknevfcvdpakggkkparlivypdlgvrvcekmalyditq
klpqavmgasygfqyspaqrveyllkawaekkdpmgfsydtrcfdstvterdirteesiy
qacslpeeartaihslterlyvggpmfnskgqtcgyrrcrasgvlttsmgntitcyvkal
aackaagivaptmlvcgddlvvisesqgteedernlrafteamtrysappgdpprpeydl
elitscssnvsvalgprgrrryylardpttplaraawetvrhspinswlgniiqyaptiw
vrmvlmthffsilmvqdtldqnlnfemygsvysvnpldlpaiierlhgldafsmhtyshh
eltrvasalrklgapplrvwksraravraslisrggkaavcgrylfnwavktklkltplp
earlldlsswftvgagggdifhs

SCOPe Domain Coordinates for d2xyma_:

Click to download the PDB-style file with coordinates for d2xyma_.
(The format of our PDB-style files is described here.)

Timeline for d2xyma_: