Lineage for d4k68a_ (4k68 A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2830557Family c.1.8.3: beta-glycanases [51487] (27 proteins)
    consist of a number of sequence families
  6. 2831217Protein automated matches [190057] (28 species)
    not a true protein
  7. 2831325Species Soil metagenome [TaxId:410658] [236610] (2 PDB entries)
  8. 2831328Domain d4k68a_: 4k68 A: [253160]
    automated match to d1ur2a_
    complexed with gol

Details for d4k68a_

PDB Entry: 4k68 (more details), 2.74 Å

PDB Description: structure of a novel gh10 endoxylanase retrieved from sugarcane soil metagenome
PDB Compounds: (A:) GH10 Xylanase

SCOPe Domain Sequences for d4k68a_:

Sequence, based on SEQRES records: (download)

>d4k68a_ c.1.8.3 (A:) automated matches {Soil metagenome [TaxId: 410658]}
rtgikdfykddfrigtavatatltmkekkpllaliarefnaitpencmkweplkpqdkdw
hweaadkfvefgekhkmyivghnlvwhsqvpkevflnesggtiskealtakmqdhiatla
grykgriqawdvvneaveddgswrkspwynimgedfiakaftmahevdpkahliyndynt
espikrnfivgmiknfkkqgvpihgvgmqehlaidgpsvdeiektlialadagvrahite
ldidvlpsvwnlptaevstrfeykperdpyiqglpkdmeeklakryedifkiylkhrdki
ervtlwgtadnetwlndfpikgrtnypllfdrnqkpkpayfrlldlkk

Sequence, based on observed residues (ATOM records): (download)

>d4k68a_ c.1.8.3 (A:) automated matches {Soil metagenome [TaxId: 410658]}
rtgikdfykddfrigtavatatltmkekkpllaliarefnaitpencmkweplkpqdkdw
hweaadkfvefgekhkmyivghnlvwhsqvpkevflnesggtiskealtakmqdhiatla
grykgriqawdvvneaveddgswrkspwynimgedfiakaftmahevdpkahliyndynt
espikrnfivgmiknfkkqgvpihgvgmqehlaidgpsvdeiektlialadagvrahite
ldidvlpsvfeykperdpyiqglpkdmeeklakryedifkiylkhrdkiervtlwgtadn
etwlndfpikgrtnypllfdrnqkpkpayfrlldlkk

SCOPe Domain Coordinates for d4k68a_:

Click to download the PDB-style file with coordinates for d4k68a_.
(The format of our PDB-style files is described here.)

Timeline for d4k68a_: