Lineage for Family c.1.8.3: beta-glycanases

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2082160Family c.1.8.3: beta-glycanases [51487] (27 protein domains)
    consist of a number of sequence families

Protein Domains:

  1. 2082161Alkaline cellulase K catalytic domain [63906] (1 species)
  2. 2082165Alpha-L-arabinofuranosidase, catalytic domain [102075] (2 species)
    glycosyl hydrolase family 51
    1. 2082166Species Bacillus stearothermophilus [TaxId:1422] [102076] (4 PDB entries)
    2. 2082175Species Clostridium thermocellum [TaxId:1515] [141779] (2 PDB entries)
      Uniprot Q4CJG5 17-386
  3. 2082188Beta-1,4-galactanase [89469] (4 species)
    1. 2082189Species Bacillus licheniformis [TaxId:1402] [117367] (4 PDB entries)
      Uniprot Q65CX5 36-422 ! Uniprot Q65CX5 28-424
    2. 2082197Species Fungus (Aspergillus aculeatus) [TaxId:5053] [89470] (2 PDB entries)
    3. 2082200Species Fungus (Humicola insolens) [TaxId:34413] [89472] (1 PDB entry)
    4. 2082202Species Thielavia heterothallica, aka Myceliophthora thermophila [TaxId:78579] [89471] (2 PDB entries)
      Myceliophthora thermophila is the anamorph name whilst Thielavia heterothallica is the teleomorph name
  4. 2082211Beta-D-xylosidase, catalytic domain [102077] (2 species)
    glycosyl hydrolase family 39
    1. 2082212Species Bacillus stearothermophilus [TaxId:1422] [141780] (3 PDB entries)
      Uniprot Q9ZFM2 15-361
    2. 2082237Species Thermoanaerobacterium saccharolyticum [TaxId:28896] [102078] (2 PDB entries)
  5. 2082244beta-Galactosidase, domain 3 [51510] (2 species)
    1. 2082245Species Arthrobacter sp. c2-2 [TaxId:192168] [141778] (1 PDB entry)
      Uniprot Q8KRF6 313-609
    2. 2082252Species Escherichia coli [TaxId:562] [51511] (42 PDB entries)
      Uniprot P00722
  6. 2082453beta-Glucuronidase, domain 3 [51512] (1 species)
  7. 2082461Beta-mannanase [51502] (4 species)
    1. 2082462Species Bacillus sp. JAMB-602 [TaxId:244966] [141775] (1 PDB entry)
      Uniprot Q4W8M3 34-490
      contains additional C-terminal domain (CBM)
    2. 2082464Species Thermobifida fusca [TaxId:2021] [51503] (3 PDB entries)
    3. 2082468Species Tomato (Lycopersicon esculentum) [TaxId:4081] [141774] (1 PDB entry)
      Uniprot Q93WT4 30-399
    4. 2082470Species Trichoderma reesei [TaxId:51453] [51504] (5 PDB entries)
  8. 2082476endo-1,4-beta-mannosidase [141781] (1 species)
  9. 2082479Endocellulase E1 [51497] (1 species)
  10. 2082487Endocellulase EngI [75066] (1 species)
  11. 2082493Endoglucanase Cel5a [51499] (4 species)
    1. 2082494Species Bacillus agaradhaerens [TaxId:76935] [51500] (21 PDB entries)
      Uniprot O85465 30-329
    2. 2082516Species Bacillus subtilis [TaxId:1423] [75068] (1 PDB entry)
    3. 2082518Species Erwinia chrysanthemi [TaxId:556] [51501] (1 PDB entry)
    4. 2082522Species Pseudoalteromonas haloplanktis [TaxId:228] [141773] (2 PDB entries)
      Uniprot O86099 33-325
  12. 2082527Endoglucanase CelA [51491] (1 species)
  13. 2082530Endoglucanase CelC [51493] (1 species)
  14. 2082535Endoglucanase H N-terminal domain [141783] (1 species)
  15. 2082539Endoglucanase homologue TM1752 [102066] (1 species)
  16. 2082542Exo-beta-(1,3)-glucanase [51495] (2 species)
    1. 2082543Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [102065] (1 PDB entry)
    2. 2082546Species Yeast (Candida albicans) [TaxId:5476] [51496] (4 PDB entries)
  17. 2082551Exochitosanase CsxA [159383] (1 species)
  18. 2082559Exomannosidase [102068] (1 species)
    mannosyl-oligosaccharide glucosidase
  19. 2082563Five-domain beta-mannosidase, domain 3 [159385] (1 species)
  20. 2082569Glucosylceramidase, catalytic domain [89473] (1 species)
    acid-beta-glucosidase; glycosyl hydrolase family 30; contains additional beta-domain similar to one found in alpha amylases
  21. 2082623Glycosyl hydrolase family 5 xylanase, catalytic domain [102073] (1 species)
    overall domain organization is similar to the homologous glucosylceramidase
  22. 2082627Mannanase A, ManA [63908] (2 species)
    1. 2082628Species Cellulomonas fimi [TaxId:1708] [141776] (2 PDB entries)
      Uniprot Q9XCV5 55-420
    2. 2082632Species Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId:155077] [63909] (5 PDB entries)
  23. 2082639Plant beta-glucanases [51507] (3 species)
    1. 2082640Species Banana (Musa acuminata), 1,3-beta-glucanase [TaxId:4641] [141777] (1 PDB entry)
      Uniprot O22317 29-340
    2. 2082642Species Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId:4513] [51509] (2 PDB entries)
    3. 2082646Species Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId:4513] [51508] (1 PDB entry)
  24. 2082649Xylanase [51488] (6 species)
    1. 2082650Species Bacillus stearothermophilus, Ixt6 [TaxId:1422] [102063] (7 PDB entries)
      intra-cellular xylanase
    2. 2082665Species Bacillus stearothermophilus, Xt6 [TaxId:1422] [69386] (8 PDB entries)
      Uniprot P40943
    3. 2082674Species Cellvibrio mixtus [TaxId:39650] [102064] (4 PDB entries)
    4. 2082679Species Clostridium thermocellum, XynZ [TaxId:1515] [51489] (1 PDB entry)
      belongs to family F
    5. 2082682Species Fungus (Penicillium simplicissimum) [TaxId:69488] [51490] (1 PDB entry)
      belongs to family 10
    6. 2082684Species Thermotoga maritima [TaxId:2336] [141772] (1 PDB entry)
      Uniprot Q9WXS5 23-346
  25. 2082686Xylanase 10c [102071] (1 species)
    Endo-beta-1,4-xylanase
  26. 2082690Xylanase A, catalytic core [51514] (8 species)
    1. 2082691Species Cellulomonas fimi [TaxId:1708] [51520] (14 PDB entries)
      synonym: beta-1,4-glycanase Cex
    2. 2082706Species Emericella nidulans (Aspergillus nidulans) [TaxId:162425] [110350] (1 PDB entry)
      Uniprot Q00177
    3. 2082708Species Fungus (Penicillium simplicissimum) [TaxId:69488] [51516] (7 PDB entries)
    4. 2082716Species Pseudomonas fluorescens [TaxId:294] [51517] (7 PDB entries)
      Uniprot P14768 265-610
    5. 2082733Species Streptomyces halstedii [TaxId:1944] [102070] (1 PDB entry)
    6. 2082735Species Streptomyces lividans [TaxId:1916] [51515] (9 PDB entries)
      Uniprot P26514 43-344
    7. 2082746Species Streptomyces olivaceoviridis [TaxId:1921] [51519] (12 PDB entries)
      Uniprot Q7SI98
      N-terminal domain; fused with a ricin A-like beta-trefoil domain
    8. 2082770Species Thermoascus aurantiacus [TaxId:5087] [51518] (11 PDB entries)
  27. 2082782automated matches [190057] (26 species)
    not a true protein
    1. 2082783Species Aspergillus niger [TaxId:425011] [311484] (1 PDB entry)
    2. 2082786Species Aspergillus niger [TaxId:5061] [260290] (4 PDB entries)
    3. 2082789Species Bacillus agaradhaerens [TaxId:76935] [187246] (1 PDB entry)
    4. 2082791Species Bacillus halodurans [TaxId:86665] [188453] (1 PDB entry)
    5. 2082793Species Bacillus licheniformis [TaxId:1402] [187025] (3 PDB entries)
    6. 2082799Species Bacillus sp. [TaxId:65673] [187690] (9 PDB entries)
    7. 2082809Species Bacillus sp. [TaxId:89769] [189058] (3 PDB entries)
    8. 2082813Species Bacteroides thetaiotaomicron [TaxId:226186] [255614] (7 PDB entries)
    9. Species Bacteroides thetaiotaomicron [TaxId:818] [255622] (1 PDB entry)
    10. 2082831Species Cellulomonas fimi [TaxId:1708] [231537] (1 PDB entry)
    11. 2082834Species Cellvibrio mixtus [TaxId:39650] [255089] (1 PDB entry)
    12. 2082836Species Clostridium thermocellum [TaxId:1515] [187247] (4 PDB entries)
    13. 2082841Species Emericella nidulans [TaxId:162425] [226738] (1 PDB entry)
    14. 2082843Species Hypocrea jecorina [TaxId:431241] [311485] (1 PDB entry)
    15. 2082845Species Podospora anserina [TaxId:5145] [256160] (1 PDB entry)
    16. 2082847Species Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId:155077] [188920] (1 PDB entry)
    17. 2082849Species Rubber tree (Hevea brasiliensis) [TaxId:3981] [189057] (4 PDB entries)
    18. 2082866Species Soil metagenome [TaxId:410658] [236610] (2 PDB entries)
    19. 2082871Species Streptomyces olivaceoviridis [TaxId:1921] [225150] (10 PDB entries)
    20. 2082886Species Streptomyces thermolilacinus [TaxId:285540] [272999] (2 PDB entries)
    21. 2082891Species Thermoascus aurantiacus [TaxId:5087] [190006] (5 PDB entries)
    22. 2082899Species Thermotoga petrophila [TaxId:390874] [189941] (2 PDB entries)
    23. 2082904Species Yeast (Candida albicans) [TaxId:5476] [188406] (8 PDB entries)
    24. 2268447Species Geobacillus sp. [TaxId:575526] [311753] (1 PDB entry)
    25. 2268882Species Bacillus sp. [TaxId:253629] [312188] (1 PDB entry)
    26. 2287033Species Talaromyces verruculosus [TaxId:198730] [330334] (2 PDB entries)

More info for Family c.1.8.3: beta-glycanases

Timeline for Family c.1.8.3: beta-glycanases: