PDB entry 4qrn

View 4qrn on RCSB PDB site
Description: HIGH-RESOLUTION CRYSTAL STRUCTURE of 5-CARBOXYVANILLATE DECARBOXYLASE (TARGET EFI-505250) FROM NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 COMPLEXED WITH MANGANESE AND 4-HYDROXY-3-METHOXY-5-NITROBENZOIC ACID
Class: hydrolase/hydrolase inhibitor
Keywords: HYDROLASE, DECARBOXYLASE, ENZYME FUNCTION INITIATIVE, EFI, HYDROLASE-HYDROLASE INHIBITOR complex
Deposited on 2014-07-01, released 2014-08-06
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-08-06, with a file datestamp of 2014-08-01.
Experiment type: XRAY
Resolution: 1.07 Å
R-factor: 0.136
AEROSPACI score: 0.87 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5-carboxyvanillate decarboxylase
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: SARO_0799
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2GA79 (22-372)
      • expression tag (21)
  • Chain 'B':
    Compound: 5-carboxyvanillate decarboxylase
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: SARO_0799
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4qrnb_
  • Chain 'C':
    Compound: 5-carboxyvanillate decarboxylase
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: SARO_0799
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4qrnc_
  • Chain 'D':
    Compound: 5-carboxyvanillate decarboxylase
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: SARO_0799
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4qrnd_
  • Heterogens: MN, 1DF, GOL, CL, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4qrnB (B:)
mhhhhhhssgvdlgtenlyfqsmtqdlktggeqgylriateeafatreiidvylrmirdg
tadkgmvslwgfyaqspseratqilerlldlgerriadmdatgidkailaltspgvqplh
dldeartlatrandtladacqkypdrfigmgtvapqdpewsareihrgarelgfkgiqin
shtqgryldeeffdpifralvevdqplyihpatspdsmidpmleagldgaifgfgvetgm
hllrlitigifdkypslqimvghmgealpywlyrldymhqagvrsqryermkplkktieg
ylksnvlvtnsgvawepaikfcqqvmgedrvmyamdypyqyvadevramdamdmsaqtkk
kffqtnaekwfkl

    Sequence, based on observed residues (ATOM records): (download) 
    >4qrnB (B:)
dlktggeqgylriateeafatreiidvylrmirdgtadkgmvslwgfyaqspseratqil
erlldlgerriadmdatgidkailaltspgvqplhdldeartlatrandtladacqkypd
rfigmgtvapqdpewsareihrgarelgfkgiqinshtqgryldeeffdpifralvevdq
plyihpatspdsmidpmleagldgaifgfgvetgmhllrlitigifdkypslqimvghmg
ealpywlyrldymhqagvrsqryermkplkktiegylksnvlvtnsgvawepaikfcqqv
mgedrvmyamdypyqyvadevramdamdmsaqtkkkffqtnaekwfkl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4qrnC (C:)
mhhhhhhssgvdlgtenlyfqsmtqdlktggeqgylriateeafatreiidvylrmirdg
tadkgmvslwgfyaqspseratqilerlldlgerriadmdatgidkailaltspgvqplh
dldeartlatrandtladacqkypdrfigmgtvapqdpewsareihrgarelgfkgiqin
shtqgryldeeffdpifralvevdqplyihpatspdsmidpmleagldgaifgfgvetgm
hllrlitigifdkypslqimvghmgealpywlyrldymhqagvrsqryermkplkktieg
ylksnvlvtnsgvawepaikfcqqvmgedrvmyamdypyqyvadevramdamdmsaqtkk
kffqtnaekwfkl

    Sequence, based on observed residues (ATOM records): (download) 
    >4qrnC (C:)
dlktggeqgylriateeafatreiidvylrmirdgtadkgmvslwgfyaqspseratqil
erlldlgerriadmdatgidkailaltspgvqplhdldeartlatrandtladacqkypd
rfigmgtvapqdpewsareihrgarelgfkgiqinshtqgryldeeffdpifralvevdq
plyihpatspdsmidpmleagldgaifgfgvetgmhllrlitigifdkypslqimvghmg
ealpywlyrldymhqagvrsqryermkplkktiegylksnvlvtnsgvawepaikfcqqv
mgedrvmyamdypyqyvadevramdamdmsaqtkkkffqtnaekwfkl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4qrnD (D:)
mhhhhhhssgvdlgtenlyfqsmtqdlktggeqgylriateeafatreiidvylrmirdg
tadkgmvslwgfyaqspseratqilerlldlgerriadmdatgidkailaltspgvqplh
dldeartlatrandtladacqkypdrfigmgtvapqdpewsareihrgarelgfkgiqin
shtqgryldeeffdpifralvevdqplyihpatspdsmidpmleagldgaifgfgvetgm
hllrlitigifdkypslqimvghmgealpywlyrldymhqagvrsqryermkplkktieg
ylksnvlvtnsgvawepaikfcqqvmgedrvmyamdypyqyvadevramdamdmsaqtkk
kffqtnaekwfkl

    Sequence, based on observed residues (ATOM records): (download) 
    >4qrnD (D:)
tqdlktggeqgylriateeafatreiidvylrmirdgtadkgmvslwgfyaqspseratq
ilerlldlgerriadmdatgidkailaltspgvqplhdldeartlatrandtladacqky
pdrfigmgtvapqdpewsareihrgarelgfkgiqinshtqgryldeeffdpifralvev
dqplyihpatspdsmidpmleagldgaifgfgvetgmhllrlitigifdkypslqimvgh
mgealpywlyrldymhqagvrsqryermkplkktiegylksnvlvtnsgvawepaikfcq
qvmgedrvmyamdypyqyvadevramdamdmsaqtkkkffqtnaekwfkl