Class i: Low resolution protein structures [58117] (25 folds) |
Fold i.8: RNA polymerase [58180] (1 superfamily) |
Superfamily i.8.1: RNA polymerase [58181] (1 family) |
Family i.8.1.1: RNA polymerase [58182] (2 proteins) |
Protein DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits [58183] (1 species) |
Species Thermus aquaticus [TaxId:271] [58184] (3 PDB entries) |
Domain d1l9zc_: 1l9z C: [73768] holoenzyme/fork-junction promoter DNA complex at 6.5 Angstrom resolution protein/DNA complex; protein/RNA complex; complexed with mg, zn |
PDB Entry: 1l9z (more details), 6.5 Å
SCOPe Domain Sequences for d1l9zc_:
Sequence, based on SEQRES records: (download)
>d1l9zc_ i.8.1.1 (C:) DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits {Thermus aquaticus [TaxId: 271]} eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegdkgk gglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplm tedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgv vtmkvnkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftl lrpgdppkkdkalaylfglladpkrydlgeagrykaeeklgvglsgrtlvrfedgefkde vflptlrylfaltagvpghevddidhlgnrrirtvgelmadqfrvglarlargvrermvm gspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggltre ragfdvrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvte evvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfs lntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedg evvkvdgtriavryedgrlvhplrryarsnqgtafdqrprvrvgqrvkkgdlladgpase egflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperi trdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgeka rdvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanr hgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryi spvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeq lkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedkmharstgpyslitqqplg gkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvp esfrvlvkelqalaldvqtldekdnpvdifegla
>d1l9zc_ i.8.1.1 (C:) DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits {Thermus aquaticus [TaxId: 271]} eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieeglvld fleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsf iingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgvvtmkvn krkfplvlllrvlgydqetlvrelsglldeavlamrpeeamvrlftllrpglaylfglla dpkrydlgeagrykaeeklgvglsgrtlvfkdevflptlrylfaltagvpghevddidhl gnrrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsr sqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpegan iglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdri atdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqa vpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvhplrrya rsnqgtafdqrprvrvgqrvdlladgpaseegflalgqnvlvaimpfdgynfedaivise ellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpg dilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpg velkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdviln plgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqge gfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqm fimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqem ltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdif egla
Timeline for d1l9zc_: