SCOPe 2.08: Domain d1l9zc_: 1l9z C:

Lineage for d1l9zc_ (1l9z C:)

1. Root: SCOPe 2.08

2. Class i: Low resolution protein structures [58117] (25 folds)

3. Fold i.8: RNA polymerase [58180] (1 superfamily)

4. Superfamily i.8.1: RNA polymerase [58181] (1 family)

5. Family i.8.1.1: RNA polymerase [58182] (2 proteins)

6. Protein DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits [58183] (1 species)

7. Species Thermus aquaticus [TaxId:271] [58184] (3 PDB entries)

8. Domain d1l9zc_: 1l9z C: [73768]
   holoenzyme/fork-junction promoter DNA complex at 6.5 Angstrom resolution
   protein/DNA complex; protein/RNA complex; complexed with mg, zn

Details for d1l9zc_

PDB Entry: 1l9z, 6.5 Å

PDB Description: Thermus aquaticus RNA Polymerase Holoenzyme/Fork-Junction Promoter DNA Complex at 6.5 A Resolution

PDB Compounds: (C:) RNA polymerase, beta subunit

SCOPe Domain Sequences for d1l9zc_:

Sequence, based on SEQRES records:

>d1l9zc_ i.8.1.1 (C:) DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits {Thermus aquaticus [TaxId: 271]}
eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegdkgk
gglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplm
tedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgv
vtmkvnkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftl
lrpgdppkkdkalaylfglladpkrydlgeagrykaeeklgvglsgrtlvrfedgefkde
vflptlrylfaltagvpghevddidhlgnrrirtvgelmadqfrvglarlargvrermvm
gspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggltre
ragfdvrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvte
evvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfs
lntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedg
evvkvdgtriavryedgrlvhplrryarsnqgtafdqrprvrvgqrvkkgdlladgpase
egflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperi
trdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgeka
rdvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanr
hgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryi
spvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeq
lkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedkmharstgpyslitqqplg
gkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvp
esfrvlvkelqalaldvqtldekdnpvdifegla

Sequence, based on observed residues (ATOM records):

>d1l9zc_ i.8.1.1 (C:) DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits {Thermus aquaticus [TaxId: 271]}
eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieeglvld
fleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsf
iingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgvvtmkvn
krkfplvlllrvlgydqetlvrelsglldeavlamrpeeamvrlftllrpglaylfglla
dpkrydlgeagrykaeeklgvglsgrtlvfkdevflptlrylfaltagvpghevddidhl
gnrrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsr
sqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpegan
iglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdri
atdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqa
vpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvhplrrya
rsnqgtafdqrprvrvgqrvdlladgpaseegflalgqnvlvaimpfdgynfedaivise
ellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpg
dilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpg
velkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdviln
plgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqge
gfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqm
fimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqem
ltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdif
egla

Timeline for d1l9zc_:

• d1l9zc_ first appeared in SCOP 1.61
  
• d1l9zc_ appears in SCOPe 2.07