Lineage for d1inia_ (1ini A:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2473281Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2473282Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2473945Family c.68.1.13: Cytidylytransferase [68901] (7 proteins)
  6. 2473946Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) [64140] (4 species)
  7. 2473947Species Escherichia coli [TaxId:562] [64141] (6 PDB entries)
  8. 2473950Domain d1inia_: 1ini A: [66219]
    complexed with cdm, mg

Details for d1inia_

PDB Entry: 1ini (more details), 1.82 Å

PDB Description: crystal structure of 4-diphosphocytidyl-2-c-methylerythritol (cdp-me) synthetase (ygbp) involved in mevalonate independent isoprenoid biosynthesis, complexed with cdp-me and mg2+
PDB Compounds: (A:) 4-diphosphocytidyl-2-c-methylerythritol synthetase

SCOPe Domain Sequences for d1inia_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1inia_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1inia_:

Click to download the PDB-style file with coordinates for d1inia_.
(The format of our PDB-style files is described here.)

Timeline for d1inia_: