Lineage for Protein: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133681Family c.68.1.13: Cytidylytransferase [68901] (7 protein domains)
  6. 2133682Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) [64140] (4 species)

Species:

  1. 2133683Escherichia coli [TaxId:562] [64141] (6 PDB entries)
    1. Domains for 1h3m:
      1. 2133689Domain d1h3ma_: 1h3m A: [90600]
        complexed with cl, n2p
      2. 2133690Domain d1h3mb_: 1h3m B: [90601]
        complexed with cl, n2p
    2. Domain for 1i52:
    3. Domain for 1ini:
    4. Domain for 1inj:
    5. Domains for 1vgt:
      1. 2133686Domain d1vgta_: 1vgt A: [100604]
        structural genomics
      2. 2133687Domain d1vgtb_: 1vgt B: [100605]
        structural genomics
    6. Domains for 1vgu:
      1. 2133691Domain d1vgua_: 1vgu A: [100606]
        structural genomics
      2. 2133692Domain d1vgub_: 1vgu B: [100607]
        structural genomics
  2. 2133693Neisseria gonorrhoeae [TaxId:485] [102605] (2 PDB entries)
    1. Domains for 1vgw:
      1. 2133694Domain d1vgwa_: 1vgw A: [100612]
        structural genomics
      2. 2133695Domain d1vgwb_: 1vgw B: [100613]
        structural genomics
      3. 2133696Domain d1vgwc_: 1vgw C: [100614]
        structural genomics
      4. 2133697Domain d1vgwd_: 1vgw D: [100615]
        structural genomics
      5. 2133698Domain d1vgwe_: 1vgw E: [100616]
        structural genomics
      6. 2133699Domain d1vgwf_: 1vgw F: [100617]
        structural genomics
    2. Domains for 1vgz:
      1. 2133700Domain d1vgza_: 1vgz A: [100624]
        structural genomics
        complexed with so4
      2. 2133701Domain d1vgzb_: 1vgz B: [100625]
        structural genomics
        complexed with so4
  3. 2133702Thale cress (Arabidopsis thaliana), chloroplast [TaxId:3702] [142690] (11 PDB entries)
    Uniprot P69834 75-300
    1. Domain for 1w77:
    2. Domain for 2yc3:
    3. Domain for 2yc5:
    4. Domain for 4nai:
    5. Domain for 4nak:
    6. Domain for 4nal:
    7. Domain for 4nan:
    8. Domain for 5mrm:
    9. Domain for 5mrn:
    10. Domain for 5mro:
    11. Domain for 5mrq:
  4. 2133710Thermotoga maritima [TaxId:2336] [117699] (1 PDB entry)
    Uniprot Q9X1B3

More info for Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) from c.68.1.13: Cytidylytransferase

Timeline for Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) from c.68.1.13: Cytidylytransferase: