PDB entry 1ini
View 1ini on RCSB PDB site
Description: crystal structure of 4-diphosphocytidyl-2-c-methylerythritol (cdp-me) synthetase (ygbp) involved in mevalonate independent isoprenoid biosynthesis, complexed with cdp-me and mg2+
Class: transferase
Keywords: ygbp, cytidylyltransferase, deoxyxylulose-5-phosphate pathway (dxp), isoprenoid biosynthesis, cdpme, mg, transferase
Deposited on
2001-05-14, released
2001-11-14
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.82 Å
R-factor: 0.222
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 4-diphosphocytidyl-2-c-methylerythritol synthetase
Species: Escherichia coli [TaxId:83333]
Gene: ISPD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1inia_ - Heterogens: MG, CDM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1iniA (A:)
matthldvcavvpaagfgrrmqtecpkqylsignqtilehsvhallahprvkrvviaisp
gdsrfaqlplanhpqitvvdggderadsvlaglkaagdaqwvlvhdaarpclhqddlarl
lalsetsrtggilaapvrdtmkraepgknaiahtvdrnglwhaltpqffprellhdcltr
alnegatitdeasaleycgfhpqlvegradnikvtrpedlalaefyltrtihqent
Sequence, based on observed residues (ATOM records): (download)
>1iniA (A:)
thldvcavvpaagfgrrmqtecpkqylsignqtilehsvhallahprvkrvviaispgds
rfaqlplanhpqitvvdggderadsvlaglkaagdaqwvlvhdaarpclhqddlarllal
setsrtggilaapvrdtmkraepgknaiahtvdrnglwhaltpqffprellhdcltraln
egatitdeasaleycgfhpqlvegradnikvtrpedlalaefylt