Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133681Family c.68.1.13: Cytidylytransferase [68901] (7 protein domains)
  6. 2133682Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) [64140] (4 species)
  7. 2133683Species Escherichia coli [TaxId:562] [64141] (6 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1h3m:
    1. 2133689Domain d1h3ma_: 1h3m A: [90600]
      complexed with cl, n2p
    2. 2133690Domain d1h3mb_: 1h3m B: [90601]
      complexed with cl, n2p
  2. Domain(s) for 1i52:
  3. Domain(s) for 1ini:
  4. Domain(s) for 1inj:
  5. Domain(s) for 1vgt:
    1. 2133686Domain d1vgta_: 1vgt A: [100604]
      structural genomics
    2. 2133687Domain d1vgtb_: 1vgt B: [100605]
      structural genomics
  6. Domain(s) for 1vgu:
    1. 2133691Domain d1vgua_: 1vgu A: [100606]
      structural genomics
    2. 2133692Domain d1vgub_: 1vgu B: [100607]
      structural genomics

More info for Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)

Timeline for Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP):

  • Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) first appeared in SCOP 1.57, called Species Escherichia coli [TaxId:562] from c.68.1.11 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP)
  • Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) appears in SCOPe 2.05