Lineage for Protein: Bacteriorhodopsin

  1. Root: SCOP 1.71
  2. 619386Class f: Membrane and cell surface proteins and peptides [56835] (49 folds)
  3. 619837Fold f.13: Family A G protein-coupled receptor-like [81322] (1 superfamily)
    core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane
  4. 619838Superfamily f.13.1: Family A G protein-coupled receptor-like [81321] (2 families) (S)
  5. 619839Family f.13.1.1: Bacteriorhodopsin-like [81319] (5 proteins)
  6. 619844Protein Bacteriorhodopsin [56871] (2 species)
    a light-driven proton pump

Species:

  1. 619845Archaeon Halobacterium halobium [TaxId:2242] [56872] (3 PDB entries)
    1. Domain for 1bm1:
    2. Domain for 1brd:
    3. Domain for 2brd:
  2. 619849Archaeon Halobacterium salinarum [TaxId:2242] [56873] (54 PDB entries)
    1. Domain for 1ap9:
    2. Domain for 1at9:
    3. Domains for 1brr:
      1. 619910Domain d1brra_: 1brr A: [43421]
      2. 619911Domain d1brrb_: 1brr B: [43422]
      3. 619912Domain d1brrc_: 1brr C: [43423]
        complexed with arc, gas, glc, man, oct, ret
    4. Domain for 1brx:
    5. Domain for 1c3w:
    6. Domain for 1c8r:
    7. Domain for 1c8s:
    8. Domains for 1cwq:
      1. 619901Domain d1cwqa_: 1cwq A: [43412]
      2. 619902Domain d1cwqb_: 1cwq B: [43413]
        M intermediate structure (A) superimposed on the ground state structure (B)
        complexed with hex, oct, ret, trd, und
    9. Domain for 1dze:
      • 619904Domain d1dzea_: 1dze A: [43419]
        M intermediate trapped at 100K
        complexed with gal, glc, l1p, l2p, l3p, l4p, man, ret
    10. Domains for 1e0p:
      1. 619907Domain d1e0pa_: 1e0p A: [43416]
      2. 619908Domain d1e0pb_: 1e0p B: [43417]
        L intermediate
        complexed with ret
    11. Domain for 1f4z:
    12. Domain for 1f50:
    13. Domain for 1fbb:
    14. Domain for 1fbk:
    15. Domain for 1iw6:
      • 619897Domain d1iw6a_: 1iw6 A: [76865]
        ground state
        complexed with gal, glc, l2p, l3p, man, ret
    16. Domain for 1iw9:
    17. Domain for 1ixf:
      • 619909Domain d1ixfa_: 1ixf A: [76908]
        K intermediate
        complexed with gal, glc, l2p, l3p, man, ret
    18. Domain for 1jv6:
    19. Domain for 1jv7:
    20. Domain for 1kg8:
      • 619867Domain d1kg8a_: 1kg8 A: [68579]
        an early-M intermediate
        complexed with li1, ret
    21. Domain for 1kg9:
      • 619863Domain d1kg9a_: 1kg9 A: [68580]
        a "mock-trapped" early-M intermediate
        complexed with li1, ret
    22. Domain for 1kgb:
    23. Domains for 1kme:
      1. 619874Domain d1kmea_: 1kme A: [68692]
      2. 619875Domain d1kmeb_: 1kme B: [68693]
        complexed with glc, ret, squ
    24. Domain for 1l0m:
    25. Domain for 1m0k:
    26. Domain for 1m0l:
    27. Domain for 1m0m:
    28. Domain for 1mgy:
    29. Domain for 1o0a:
    30. Domain for 1p8h:
    31. Domain for 1p8i:
    32. Domain for 1p8u:
    33. Domains for 1pxr:
      1. 619861Domain d1pxra_: 1pxr A: [95297]
      2. 619862Domain d1pxrb_: 1pxr B: [95298]
        complexed with ret; mutant
    34. Domains for 1pxs:
      1. 619876Domain d1pxsa_: 1pxs A: [95299]
      2. 619877Domain d1pxsb_: 1pxs B: [95300]
        complexed with ret; mutant
    35. Domains for 1py6:
      1. 619864Domain d1py6a_: 1py6 A: [95327]
      2. 619865Domain d1py6b_: 1py6 B: [95328]
        complexed with ret
    36. Domains for 1q5i:
      1. 619881Domain d1q5ia_: 1q5i A: [95896]
      2. 619882Domain d1q5ib_: 1q5i B: [95897]
        complexed with ret; mutant
    37. Domains for 1q5j:
      1. 619878Domain d1q5ja_: 1q5j A: [95898]
      2. 619879Domain d1q5jb_: 1q5j B: [95899]
        complexed with ret; mutant
    38. Domain for 1qhj:
    39. Domain for 1qko:
    40. Domain for 1qkp:
    41. Domain for 1qm8:
      • 619905Domain d1qm8a_: 1qm8 A: [43420]
        complexed with gal, glc, l1p, l2p, l3p, l4p, man, ret
    42. Domain for 1r2n:
    43. Domain for 1r84:
    44. Domains for 1s51:
      1. 619885Domain d1s51a_: 1s51 A: [98517]
      2. 619886Domain d1s51b_: 1s51 B: [98518]
        complexed with ret; mutant
    45. Domains for 1s52:
      1. 619887Domain d1s52a_: 1s52 A: [98519]
      2. 619888Domain d1s52b_: 1s52 B: [98520]
        complexed with ret; mutant
    46. Domains for 1s53:
      1. 619871Domain d1s53a_: 1s53 A: [98521]
      2. 619872Domain d1s53b_: 1s53 B: [98522]
        complexed with ret; mutant
    47. Domains for 1s54:
      1. 619893Domain d1s54a_: 1s54 A: [98523]
      2. 619894Domain d1s54b_: 1s54 B: [98524]
        complexed with ret; mutant
    48. Domain for 1s8j:
    49. Domain for 1s8l:
    50. Domains for 1tn0:
      1. 619891Domain d1tn0a_: 1tn0 A: [112523]
      2. 619892Domain d1tn0b_: 1tn0 B: [112524]
        complexed with ret; mutant
    51. Domains for 1tn5:
      1. 619895Domain d1tn5a_: 1tn5 A: [112525]
      2. 619896Domain d1tn5b_: 1tn5 B: [112526]
        complexed with ret; mutant
    52. Domain for 1ucq:
    53. Domain for 1vjm:
    54. Domain for 2at9:

More info for Protein Bacteriorhodopsin from f.13.1.1: Bacteriorhodopsin-like

Timeline for Protein Bacteriorhodopsin from f.13.1.1: Bacteriorhodopsin-like: