Lineage for Family c.67.1.4: GABA-aminotransferase-like

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2895166Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2895167Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2896011Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
    formerly omega-Aminoacid:pyruvate aminotransferase-like

Proteins:

  1. 28960121-aminocyclopropane-1-carboxylate synthase (ACC synthase) [53440] (2 species)
    1. 2896013Species Apple (Malus domestica) [TaxId:3750] [53441] (5 PDB entries)
    2. 2896020Species Tomato (Lycopersicon esculentum) [TaxId:4081] [64130] (2 PDB entries)
  2. 28960242-amino-3-ketobutyrate CoA ligase [64128] (1 species)
  3. 28960283-amino-5-hydroxybenzoic acid synthase (AHBA synthase) [53434] (1 species)
  4. 28960324-aminobutyrate aminotransferase, GABA-aminotransferase [53424] (2 species)
    1. 2896033Species Escherichia coli [TaxId:562] [110686] (5 PDB entries)
      Uniprot P22256
    2. 2896054Species Pig (Sus scrofa) [TaxId:9823] [53425] (9 PDB entries)
  5. 28960915-aminolevulinate synthase [142676] (1 species)
  6. 2896094Acetylornithine/acetyl-lysine aminotransferase ArgD [142674] (1 species)
  7. 2896102Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA [53438] (2 species)
    synonym: 7,8-diaminopelargonic acid synthase
    1. 2896103Species Bacillus subtilis [TaxId:1423] [188929] (2 PDB entries)
    2. 2896108Species Escherichia coli [TaxId:562] [53439] (11 PDB entries)
  8. 2896131Aminotransferase ArnB [82488] (1 species)
    4-amino-4-deoxy-L-arabinose liposaccharide modifying enzyme
  9. 2896136Aminotransferase homolog WlaK (PglE, Cj1121c) [102603] (1 species)
  10. 2896144Dialkylglycine decarboxylase [53418] (1 species)
  11. 2896159Glutamate-1-semialdehyde aminomutase (aminotransferase) [53420] (2 species)
    1. 2896160Species Synechococcus elongatus [TaxId:32046] [142669] (1 PDB entry)
      Uniprot Q8DLK8 45-437
    2. 2896162Species Synechococcus sp., strain GR6 [TaxId:1131] [53421] (3 PDB entries)
  12. 2896169Ornithine aminotransferase [53422] (3 species)
    1. 2896170Species Human (Homo sapiens) [TaxId:9606] [53423] (11 PDB entries)
    2. 2896202Species Plasmodium falciparum [TaxId:5836] [189413] (1 PDB entry)
    3. 2896207Species Plasmodium yoelii yoelii [TaxId:73239] [142670] (1 PDB entry)
      Uniprot Q7RT90 7-410
  13. 2896214Phosphoserine aminotransferase, PSAT [53426] (3 species)
    1. 2896215Species Bacillus alcalophilus [TaxId:1445] [117697] (12 PDB entries)
      Uniprot Q9RME2
    2. 2896240Species Bacillus circulans, subsp. alkalophilus [TaxId:1397] [53427] (3 PDB entries)
      Uniprot Q59196
    3. 2896245Species Escherichia coli [TaxId:562] [53428] (2 PDB entries)
  14. 2896250PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) [53436] (1 species)
  15. 2896255Serine hydroxymethyltransferase [53429] (7 species)
    1. 2896256Species Bacillus stearothermophilus [TaxId:1422] [75272] (39 PDB entries)
    2. 2896298Species Escherichia coli [TaxId:562] [53433] (2 PDB entries)
    3. 2896307Species Human (Homo sapiens) [TaxId:9606] [53432] (2 PDB entries)
    4. 2896310Species Human (Homo sapiens), mitochondrial [TaxId:9606] [142671] (8 PDB entries)
      Uniprot P34897 42-504
    5. 2896325Species Mouse (Mus musculus) [TaxId:10090] [53431] (1 PDB entry)
    6. 2896330Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53430] (6 PDB entries)
      Uniprot P07511
    7. 2896345Species Soybean (Glycine max) [TaxId:3847] [380557] (5 PDB entries)
  16. 2896358Spore coat polysaccharide biosynthesis protein C [142672] (1 species)
  17. 2896366automated matches [190152] (25 species)
    not a true protein
    1. 2896367Species Acinetobacter baumannii [TaxId:470] [334358] (1 PDB entry)
    2. 2896369Species Aphanothece halophytica [TaxId:72020] [387036] (3 PDB entries)
    3. 2896374Species Bacillus anthracis [TaxId:261594] [189189] (1 PDB entry)
    4. 2896379Species Bacillus subtilis [TaxId:1423] [188688] (2 PDB entries)
    5. 2896383Species Burkholderia cenocepacia [TaxId:216591] [229698] (4 PDB entries)
    6. 2896398Species Burkholderia cepacia [TaxId:292] [186906] (3 PDB entries)
    7. 2896402Species Campylobacter jejuni [TaxId:197] [275525] (1 PDB entry)
    8. 2896404Species Citrobacter rodentium [TaxId:97825] [329042] (1 PDB entry)
    9. 2896406Species Coxiella burnetii [TaxId:227377] [193632] (1 PDB entry)
    10. 2896409Species Escherichia coli [TaxId:562] [187107] (2 PDB entries)
    11. 2896419Species Human (Homo sapiens) [TaxId:9606] [255069] (1 PDB entry)
    12. 2896422Species Medicago truncatula [TaxId:3880] [352361] (3 PDB entries)
    13. 2896437Species Plasmodium falciparum [TaxId:36329] [255985] (1 PDB entry)
    14. 2896442Species Rhodobacter capsulatus [TaxId:1061] [187497] (3 PDB entries)
    15. 2896454Species Salmonella enterica [TaxId:90371] [237706] (1 PDB entry)
    16. 2896456Species Salmonella typhimurium [TaxId:90371] [188804] (1 PDB entry)
    17. 2896459Species Staphylococcus aureus [TaxId:93062] [189536] (1 PDB entry)
    18. 2896464Species Streptococcus thermophilus [TaxId:1308] [383816] (1 PDB entry)
    19. 2896466Species Streptococcus thermophilus [TaxId:299768] [270038] (8 PDB entries)
    20. 2896490Species Synechococcus elongatus [TaxId:1140] [193337] (1 PDB entry)
    21. 2896492Species Synechococcus elongatus [TaxId:269084] [187818] (8 PDB entries)
    22. 2896508Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [318454] (6 PDB entries)
    23. 2896523Species Thermus thermophilus HB8 [TaxId:300852] [187623] (1 PDB entry)
    24. 2896526Species Wild boar (Sus scrofa) [311140] (1 PDB entry)
    25. 2896531Species Yersinia pestis [TaxId:214092] [189635] (1 PDB entry)

More info for Family c.67.1.4: GABA-aminotransferase-like

Timeline for Family c.67.1.4: GABA-aminotransferase-like: