Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies) main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest |
Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) |
Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins) formerly omega-Aminoacid:pyruvate aminotransferase-like |
Protein automated matches [190152] (25 species) not a true protein |
Acinetobacter baumannii [TaxId:470] [334358] (1 PDB entry) |
Domain d5vmba1: 5vmb A:1-417 [334359] Other proteins in same PDB: d5vmba2 automated match to d4n0wb_ |
Aphanothece halophytica [TaxId:72020] [387036] (3 PDB entries) |
Domain d6ymda_: 6ymd A: [387090] automated match to d3pgya_ complexed with edo, mli, na, pmp |
Domain d6ymdb_: 6ymd B: [387037] automated match to d3pgya_ complexed with edo, mli, na, pmp |
Domain d6ymea1: 6yme A:3-426 [387096] Other proteins in same PDB: d6ymea2 automated match to d3pgya_ complexed with gol, llp, peg |
Domain d6ymfa_: 6ymf A: [387063] automated match to d3pgya_ complexed with 1pe, gol, pls |
Bacillus anthracis [TaxId:261594] [189189] (1 PDB entry) |
Domain d3k28a_: 3k28 A: [178974] automated match to d2gsaa_ complexed with ca, cl, plp |
Domain d3k28b_: 3k28 B: [178975] automated match to d2gsaa_ complexed with ca, cl, plp |
Domain d3k28c_: 3k28 C: [178976] automated match to d2gsaa_ complexed with ca, cl, plp |
Domain d3k28d_: 3k28 D: [178977] automated match to d2gsaa_ complexed with ca, cl, plp |
Bacillus subtilis [TaxId:1423] [188688] (2 PDB entries) |
Domain d3bs8a_: 3bs8 A: [172804] automated match to d2gsaa_ complexed with pmp |
Domain d6wnna_: 6wnn A: [404006] automated match to d3drda_ complexed with llp, pmp |
Domain d6wnnb_: 6wnn B: [404018] automated match to d3drda_ complexed with llp, pmp |
Burkholderia cenocepacia [TaxId:216591] [229698] (4 PDB entries) |
Domain d4msoa_: 4mso A: [229699] automated match to d3gbxa_ complexed with edo, po4 |
Domain d4msob_: 4mso B: [229700] automated match to d3gbxa_ complexed with edo, po4 |
Domain d4n0wa1: 4n0w A:1-415 [235713] Other proteins in same PDB: d4n0wa2 automated match to d4n0wc_ complexed with plp, so4 |
Domain d4n0wb_: 4n0w B: [235714] Other proteins in same PDB: d4n0wa2 automated match to d4n0wc_ complexed with plp, so4 |
Domain d4n0wc_: 4n0w C: [229707] Other proteins in same PDB: d4n0wa2 automated match to d3gbxa_ complexed with plp, so4 |
Domain d4n0wd_: 4n0w D: [235715] Other proteins in same PDB: d4n0wa2 automated match to d4n0wc_ complexed with plp, so4 |
Domain d4ot8a_: 4ot8 A: [257323] Other proteins in same PDB: d4ot8c2 automated match to d4n0wa_ complexed with plp, ser |
Domain d4ot8b_: 4ot8 B: [263342] Other proteins in same PDB: d4ot8c2 automated match to d4n0wa_ complexed with plp, ser |
Domain d4ot8c1: 4ot8 C:1-414 [263343] Other proteins in same PDB: d4ot8c2 automated match to d4n0wa_ complexed with plp, ser |
Domain d4ot8d_: 4ot8 D: [263344] Other proteins in same PDB: d4ot8c2 automated match to d4n0wa_ complexed with plp, ser |
Domain d4otla_: 4otl A: [267133] Other proteins in same PDB: d4otld2 automated match to d4n0wa_ complexed with edo, gly, plp |
Domain d4otlb_: 4otl B: [267134] Other proteins in same PDB: d4otld2 automated match to d4n0wa_ complexed with edo, gly, plp |
Domain d4otlc_: 4otl C: [267135] Other proteins in same PDB: d4otld2 automated match to d4n0wa_ complexed with edo, gly, plp |
Domain d4otld1: 4otl D:1-415 [267136] Other proteins in same PDB: d4otld2 automated match to d4n0wa_ complexed with edo, gly, plp |
Burkholderia cepacia [TaxId:292] [186906] (3 PDB entries) |
Domain d1zc9a_: 1zc9 A: [124896] automated match to d1d7ra_ complexed with k, na, pmp |
Domain d1zoba_: 1zob A: [125436] automated match to d1d7ra_ complexed with ca, mes, na, plp |
Domain d1zoda_: 1zod A: [125437] automated match to d1d7ra_ complexed with cs, mes, na, plp |
Campylobacter jejuni [TaxId:197] [275525] (1 PDB entry) |
Domain d4ztca_: 4ztc A: [275526] automated match to d1o69a_ complexed with 4ra; mutant |
Citrobacter rodentium [TaxId:97825] [329042] (1 PDB entry) |
Domain d5uc7a1: 5uc7 A:1-429 [329043] Other proteins in same PDB: d5uc7a2 automated match to d1mlya_ complexed with tar |
Coxiella burnetii [TaxId:227377] [193632] (1 PDB entry) |
Domain d3tqxa_: 3tqx A: [200860] automated match to d3tqxb_ complexed with plp |
Domain d3tqxb_: 3tqx B: [193633] automated match to d1fc4a_ complexed with plp |
Escherichia coli [TaxId:562] [187107] (2 PDB entries) |
Domain d2g6wa_: 2g6w A: [134719] automated match to d1bs0a_ complexed with llf |
Domain d6ed7a1: 6ed7 A:2-429 [373133] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Domain d6ed7b1: 6ed7 B:2-429 [373091] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Domain d6ed7c1: 6ed7 C:2-429 [373101] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Domain d6ed7d1: 6ed7 D:2-429 [373138] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Domain d6ed7e1: 6ed7 E:2-429 [373095] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Domain d6ed7f1: 6ed7 F:2-429 [373117] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Domain d6ed7g1: 6ed7 G:2-429 [373104] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Domain d6ed7h1: 6ed7 H:2-429 [373324] Other proteins in same PDB: d6ed7a2, d6ed7b2, d6ed7c2, d6ed7d2, d6ed7e2, d6ed7f2, d6ed7g2, d6ed7h2 automated match to d1qj5a_ complexed with j4j, plp |
Human (Homo sapiens) [TaxId:9606] [255069] (1 PDB entry) |
Domain d2byjb_: 2byj B: [129484] Other proteins in same PDB: d2byja1 automated match to d2oata_ complexed with plp; mutant |
Domain d2byjc_: 2byj C: [129485] Other proteins in same PDB: d2byja1 automated match to d2oata_ complexed with plp; mutant |
Medicago truncatula [TaxId:3880] [352361] (3 PDB entries) |
Domain d6ccza_: 6ccz A: [352387] automated match to d1bj4a_ complexed with act, fmt, sey |
Domain d6cczb_: 6ccz B: [352413] automated match to d1bj4a_ complexed with act, fmt, sey |
Domain d6cd0a_: 6cd0 A: [352374] automated match to d1bj4a_ complexed with act, fmt |
Domain d6cd0b_: 6cd0 B: [352377] automated match to d1bj4a_ complexed with act, fmt |
Domain d6cd0c_: 6cd0 C: [352480] automated match to d1bj4a_ complexed with act, fmt |
Domain d6cd0d_: 6cd0 D: [352367] automated match to d1bj4a_ complexed with act, fmt |
Domain d6cd1a_: 6cd1 A: [352366] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Domain d6cd1b_: 6cd1 B: [352365] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Domain d6cd1c_: 6cd1 C: [352368] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Domain d6cd1d_: 6cd1 D: [352370] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Domain d6cd1e_: 6cd1 E: [352496] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Domain d6cd1f_: 6cd1 F: [352375] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Domain d6cd1g_: 6cd1 G: [352371] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Domain d6cd1h_: 6cd1 H: [352376] automated match to d1bj4a_ complexed with act, edo, gly, plg, pls |
Plasmodium falciparum [TaxId:36329] [255985] (1 PDB entry) |
Domain d3ntja_: 3ntj A: [248025] automated match to d3lg0a_ complexed with so4 |
Domain d3ntjb_: 3ntj B: [248026] automated match to d3lg0a_ complexed with so4 |
Domain d3ntjc_: 3ntj C: [248027] automated match to d3lg0a_ complexed with so4 |
Domain d3ntjd_: 3ntj D: [248028] automated match to d3lg0a_ complexed with so4 |
Rhodobacter capsulatus [TaxId:1061] [187497] (3 PDB entries) |
Domain d2bwnb_: 2bwn B: [129369] Other proteins in same PDB: d2bwna1 automated match to d2bwna1 complexed with acy, cl, fmt, plp, sin, so4 |
Domain d2bwnd_: 2bwn D: [129370] Other proteins in same PDB: d2bwna1 automated match to d2bwna1 complexed with acy, cl, fmt, plp, sin, so4 |
Domain d2bwne_: 2bwn E: [129371] Other proteins in same PDB: d2bwna1 automated match to d2bwna1 complexed with acy, cl, fmt, plp, sin, so4 |
Domain d2bwoa_: 2bwo A: [129372] automated match to d2bwna1 complexed with plp, sca |
Domain d2bwob_: 2bwo B: [129373] automated match to d2bwna1 complexed with plp, sca |
Domain d2bwod_: 2bwo D: [129374] automated match to d2bwna1 complexed with plp, sca |
Domain d2bwoe_: 2bwo E: [129375] automated match to d2bwna1 complexed with plp, sca |
Domain d2bwpa_: 2bwp A: [129376] automated match to d2bwna1 complexed with acy, plg |
Domain d2bwpb_: 2bwp B: [129377] automated match to d2bwna1 complexed with acy, plg |
Domain d2bwpd_: 2bwp D: [129378] automated match to d2bwna1 complexed with acy, plg |
Domain d2bwpe_: 2bwp E: [129379] automated match to d2bwna1 complexed with acy, plg |
Salmonella enterica [TaxId:90371] [237706] (1 PDB entry) |
Domain d4ocaa_: 4oca A: [237707] automated match to d1mdoa_ complexed with 2qr |
Salmonella typhimurium [TaxId:90371] [188804] (1 PDB entry) |
Domain d3gbxa1: 3gbx A:1-417 [176507] Other proteins in same PDB: d3gbxa2, d3gbxb2 automated match to d1dfob_ complexed with act |
Domain d3gbxb1: 3gbx B:1-417 [176508] Other proteins in same PDB: d3gbxa2, d3gbxb2 automated match to d1dfob_ complexed with act |
Staphylococcus aureus [TaxId:93062] [189536] (1 PDB entry) |
Domain d3pgya_: 3pgy A: [183727] Other proteins in same PDB: d3pgyc2, d3pgyd2 automated match to d1kkja_ complexed with cit, edo, gly; mutant |
Domain d3pgyb_: 3pgy B: [183728] Other proteins in same PDB: d3pgyc2, d3pgyd2 automated match to d1kkja_ complexed with cit, edo, gly; mutant |
Domain d3pgyc1: 3pgy C:1-411 [183729] Other proteins in same PDB: d3pgyc2, d3pgyd2 automated match to d1kkja_ complexed with cit, edo, gly; mutant |
Domain d3pgyd1: 3pgy D:1-411 [183730] Other proteins in same PDB: d3pgyc2, d3pgyd2 automated match to d1kkja_ complexed with cit, edo, gly; mutant |
Streptococcus thermophilus [TaxId:1308] [383816] (1 PDB entry) |
Domain d6ti4a_: 6ti4 A: [383817] automated match to d4wxga_ complexed with gol, mg, o3z |
Streptococcus thermophilus [TaxId:299768] [270038] (8 PDB entries) |
Domain d4wxba_: 4wxb A: [270046] automated match to d1dfoa_ complexed with cac, cit, gol, na |
Domain d4wxbb_: 4wxb B: [270042] automated match to d1dfoa_ complexed with cac, cit, gol, na |
Domain d4wxbc_: 4wxb C: [270043] automated match to d1dfoa_ complexed with cac, cit, gol, na |
Domain d4wxbd_: 4wxb D: [270045] automated match to d1dfoa_ complexed with cac, cit, gol, na |
Domain d4wxfa_: 4wxf A: [270041] automated match to d1dfoa_ complexed with gol, plg |
Domain d4wxfc_: 4wxf C: [270044] automated match to d1dfoa_ complexed with gol, plg |
Domain d4wxga_: 4wxg A: [270039] automated match to d1dfoa_ complexed with 2bo, gol, na |
Domain d4wxgc_: 4wxg C: [270040] automated match to d1dfoa_ complexed with 2bo, gol, na |
Domain d6tgha_: 6tgh A: [387046] automated match to d4wxga_ complexed with dsn, evm, na, plp |
Domain d6tghb_: 6tgh B: [386997] automated match to d4wxga_ complexed with dsn, evm, na, plp |
Domain d6tghc_: 6tgh C: [387056] automated match to d4wxga_ complexed with dsn, evm, na, plp |
Domain d6tghd_: 6tgh D: [386895] automated match to d4wxga_ complexed with dsn, evm, na, plp |
Domain d6ti1a_: 6ti1 A: [384841] automated match to d4wxga_ complexed with 2bo, gol, na |
Domain d6ti1c_: 6ti1 C: [384843] automated match to d4wxga_ complexed with 2bo, gol, na |
Domain d6ti3a_: 6ti3 A: [384844] automated match to d4wxga_ complexed with dth, gol, na |
Domain d6ti3b_: 6ti3 B: [384871] automated match to d4wxga_ complexed with dth, gol, na |
Domain d6ti3c_: 6ti3 C: [384842] automated match to d4wxga_ complexed with dth, gol, na |
Domain d6ti3d_: 6ti3 D: [384873] automated match to d4wxga_ complexed with dth, gol, na |
Domain d6ti4c_: 6ti4 C: [383825] automated match to d4wxga_ complexed with gol, mg, o3z |
Domain d6yrwa_: 6yrw A: [387102] automated match to d4wxga_ complexed with dsn, gol, plp |
Domain d6yrwb_: 6yrw B: [387110] automated match to d4wxga_ complexed with dsn, gol, plp |
Domain d6yrwc_: 6yrw C: [387019] automated match to d4wxga_ complexed with dsn, gol, plp |
Domain d6yrwd_: 6yrw D: [387086] automated match to d4wxga_ complexed with dsn, gol, plp |
Synechococcus elongatus [TaxId:1140] [193337] (1 PDB entry) |
Domain d3usfb_: 3usf B: [193338] automated match to d2gsaa_ complexed with hoz, plr |
Synechococcus elongatus [TaxId:269084] [187818] (8 PDB entries) |
Domain d2hoya_: 2hoy A: [165183] automated match to d2gsaa_ complexed with po4 |
Domain d2hoyb_: 2hoy B: [165184] automated match to d2gsaa_ complexed with po4 |
Domain d2hoza_: 2hoz A: [165185] automated match to d2gsaa_ complexed with hoz, pmp |
Domain d2hozb_: 2hoz B: [165186] automated match to d2gsaa_ complexed with hoz, pmp |
Domain d2hp1a_: 2hp1 A: [165187] automated match to d2gsaa_ complexed with ea5, hoz, plp |
Domain d2hp1b_: 2hp1 B: [165188] automated match to d2gsaa_ complexed with ea5, hoz, plp |
Domain d2hp2a_: 2hp2 A: [165189] automated match to d2gsaa_ complexed with hoz, ke4, plp |
Domain d2hp2b_: 2hp2 B: [165190] automated match to d2gsaa_ complexed with hoz, ke4, plp |
Domain d3fq7a_: 3fq7 A: [175967] automated match to d2gsaa_ complexed with pxg |
Domain d3fq7b_: 3fq7 B: [175968] automated match to d2gsaa_ complexed with pxg |
Domain d3fq8a_: 3fq8 A: [175969] automated match to d2gsaa_ complexed with pmp; mutant |
Domain d3fq8b_: 3fq8 B: [175970] automated match to d2gsaa_ complexed with pmp; mutant |
Domain d3fqaa_: 3fqa A: [175971] automated match to d2gsaa_ complexed with gab, pmp |
Domain d3fqab_: 3fqa B: [175972] automated match to d2gsaa_ complexed with gab, pmp |
Domain d3usfa_: 3usf A: [201107] automated match to d3fq7a_ complexed with hoz, plr |
Thale cress (Arabidopsis thaliana) [TaxId:3702] [318454] (6 PDB entries) |
Domain d5hdma_: 5hdm A: [318455] automated match to d2gsaa_ complexed with plp, pmp |
Domain d5hdmb_: 5hdm B: [318491] automated match to d2gsaa_ complexed with plp, pmp |
Domain d6smna_: 6smn A: [378848] Other proteins in same PDB: d6smnd2 automated match to d1ejia_ complexed with edo, mtx, pls, ser |
Domain d6smnb_: 6smn B: [378888] Other proteins in same PDB: d6smnd2 automated match to d1ejia_ complexed with edo, mtx, pls, ser |
Domain d6smnc_: 6smn C: [378846] Other proteins in same PDB: d6smnd2 automated match to d1ejia_ complexed with edo, mtx, pls, ser |
Domain d6smnd1: 6smn D:41-517 [378849] Other proteins in same PDB: d6smnd2 automated match to d1ejia_ complexed with edo, mtx, pls, ser |
Domain d6smra1: 6smr A:1-470 [378844] Other proteins in same PDB: d6smra2, d6smrb2, d6smrc2, d6smrd2 automated match to d5v7ia_ complexed with edo, mtx, pls, trs |
Domain d6smrb1: 6smr B:1-471 [378837] Other proteins in same PDB: d6smra2, d6smrb2, d6smrc2, d6smrd2 automated match to d5v7ia_ complexed with edo, mtx, pls, trs |
Domain d6smrc1: 6smr C:1-470 [378839] Other proteins in same PDB: d6smra2, d6smrb2, d6smrc2, d6smrd2 automated match to d5v7ia_ complexed with edo, mtx, pls, trs |
Domain d6smrd1: 6smr D:1-470 [378895] Other proteins in same PDB: d6smra2, d6smrb2, d6smrc2, d6smrd2 automated match to d5v7ia_ complexed with edo, mtx, pls, trs |
Domain d6smwa_: 6smw A: [378840] Other proteins in same PDB: d6smwd2 automated match to d1ejia_ complexed with edo, lya, plp, pls, ser |
Domain d6smwb_: 6smw B: [378851] Other proteins in same PDB: d6smwd2 automated match to d1ejia_ complexed with edo, lya, plp, pls, ser |
Domain d6smwc_: 6smw C: [378847] Other proteins in same PDB: d6smwd2 automated match to d1ejia_ complexed with edo, lya, plp, pls, ser |
Domain d6smwd1: 6smw D:41-517 [378842] Other proteins in same PDB: d6smwd2 automated match to d1ejia_ complexed with edo, lya, plp, pls, ser |
Domain d7dlwc_: 7dlw C: [421207] automated match to d1m4na_ complexed with ppg, so4 |
Domain d7dlwd_: 7dlw D: [421208] automated match to d1m4na_ complexed with ppg, so4 |
Domain d7dlwa_: 7dlw A: [421252] automated match to d1m4na_ complexed with ppg, so4 |
Domain d7dlwb_: 7dlw B: [421264] automated match to d1m4na_ complexed with ppg, so4 |
Domain d7dlyb_: 7dly B: [421261] automated match to d1m7ya_ complexed with ppg; mutant |
Domain d7dlya_: 7dly A: [421337] automated match to d1m7ya_ complexed with ppg; mutant |
Thermus thermophilus HB8 [TaxId:300852] [187623] (1 PDB entry) |
Domain d2dkja_: 2dkj A: [163644] automated match to d1kkja_ complexed with plp, so4 |
Domain d2dkjb_: 2dkj B: [163645] automated match to d1kkja_ complexed with plp, so4 |
Wild boar (Sus scrofa) [311140] (1 PDB entry) |
Domain d1gtxa_: 1gtx A: [302447] automated match to d4y0hd_ complexed with act, plp |
Domain d1gtxb_: 1gtx B: [302448] automated match to d4y0hd_ complexed with act, plp |
Domain d1gtxc_: 1gtx C: [302449] automated match to d4y0hd_ complexed with act, plp |
Domain d1gtxd_: 1gtx D: [302450] automated match to d4y0hd_ complexed with act, plp |
Yersinia pestis [TaxId:214092] [189635] (1 PDB entry) |
Domain d3qboa_: 3qbo A: [184322] automated match to d1bjna_ complexed with plp |
Domain d3qbob_: 3qbo B: [184323] automated match to d1bjna_ complexed with plp |
Timeline for Protein automated matches from c.67.1.4: GABA-aminotransferase-like: