Lineage for Family a.1.1.2: Globins

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1473061Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1473062Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1473136Family a.1.1.2: Globins [46463] (27 proteins)
    Heme-binding protein

Proteins:

  1. 1473137Ascaris hemoglobin, domain 1 [46520] (1 species)
  2. 1473140Bacterial dimeric hemoglobin [46526] (1 species)
  3. 1473154Chimeric hemoglobin beta-alpha [46516] (1 species)
  4. 1473160Cytoglobin [109626] (1 species)
  5. 1473176Dehaloperoxidase [46530] (1 species)
  6. 1473240Erythrocruorin [46479] (1 species)
  7. 1473246Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 [116758] (1 species)
  8. 1473254Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) [116754] (1 species)
  9. 1473262Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) [116756] (1 species)
  10. 1473270Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A) [116752] (1 species)
  11. 1473278Flavohemoglobin, N-terminal domain [46528] (2 species)
    1. 1473279Species Alcaligenes eutrophus [TaxId:106590] [46529] (1 PDB entry)
    2. 1473282Species Escherichia coli [TaxId:562] [74663] (1 PDB entry)
  12. 1473284Glycera globin [46467] (1 species)
  13. 1473294Hagfish hemoglobin [68941] (1 species)
  14. 1473302Heme-based aerotactic transducer HemAT, sensor domain [100980] (1 species)
  15. 1473308Hemoglobin [46522] (1 species)
  16. 1473312Hemoglobin I [46464] (2 species)
    1. 1473313Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [46465] (36 PDB entries)
    2. 1473400Species Clam (Lucina pectinata) [TaxId:244486] [46466] (4 PDB entries)
  17. 1473405Hemoglobin, alpha-chain [46486] (23 species)
    1. 1473406Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100976] (3 PDB entries)
      Uniprot P83134
    2. 1473410Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46497] (6 PDB entries)
    3. 1473420Species Bar-headed goose (Anser indicus) [TaxId:8846] [46493] (3 PDB entries)
    4. 1473427Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109623] (3 PDB entries)
      Uniprot Q8AYM0
    5. 1473434Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46496] (2 PDB entries)
    6. 1473437Species Chicken (Gallus gallus) [TaxId:9031] [46492] (1 PDB entry)
    7. 1473440Species Cow (Bos taurus) [TaxId:9913] [46490] (11 PDB entries)
    8. 1473463Species Deer (Odocoileus virginianus) [TaxId:9874] [46489] (1 PDB entry)
    9. 1473466Species Dog (Canis familiaris) [TaxId:9615] [189534] (2 PDB entries)
    10. 1473470Species Donkey (Equus asinus) [TaxId:9793] [158217] (1 PDB entry)
      Uniprot P01959 1-141
      beta-chain sequences of donkey and horse hemoglobins are identical
    11. 1473472Species Dusicyon thous [TaxId:9620] [186966] (1 PDB entry)
    12. 1473476Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46495] (11 PDB entries)
    13. 1473495Species Fish (Leiostomus xanthurus) [TaxId:59837] [46498] (1 PDB entry)
    14. 1473497Species Graylag goose (Anser anser) [TaxId:8843] [68938] (1 PDB entry)
    15. 1473500Species Horse (Equus caballus) [TaxId:9796] [46488] (16 PDB entries)
    16. 1473522Species Houndshark (Mustelus griseus) [TaxId:89020] [46499] (2 PDB entries)
    17. 1473527Species Human (Homo sapiens) [TaxId:9606] [46487] (224 PDB entries)
      Uniprot P69905 P01922 P01934 P01935
    18. 1473975Species Human (Homo sapiens), zeta isoform [TaxId:9606] [68937] (2 PDB entries)
    19. 1473981Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63440] (1 PDB entry)
    20. 1473984Species Peromyscus maniculatus [TaxId:10042] [224840] (1 PDB entry)
    21. 1473986Species Pig (Sus scrofa) [TaxId:9823] [46491] (3 PDB entries)
    22. 1473995Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46494] (2 PDB entries)
    23. 1473999Species Yellow perch (Perca flavescens) [TaxId:8167] [116749] (1 PDB entry)
      Uniprot P83270; 78% sequence identity
  18. 1474002Hemoglobin, beta-chain [46500] (24 species)
    1. 1474003Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100977] (3 PDB entries)
      Uniprot P83133
    2. 1474007Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46513] (6 PDB entries)
    3. 1474017Species Bar-headed goose (Anser indicus) [TaxId:8846] [46509] (3 PDB entries)
    4. 1474024Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109624] (3 PDB entries)
      Uniprot Q8AYM1
    5. 1474031Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46512] (2 PDB entries)
    6. 1474034Species Chicken (Gallus gallus) [TaxId:9031] [46508] (1 PDB entry)
    7. 1474037Species Cow (Bos taurus) [TaxId:9913] [46506] (11 PDB entries)
    8. 1474060Species Deer (Odocoileus virginianus) [TaxId:9874] [46505] (1 PDB entry)
    9. 1474063Species Dog (Canis familiaris) [TaxId:9615] [158218] (3 PDB entries)
    10. 1474069Species Donkey (Equus asinus) [TaxId:9793] [158216] (1 PDB entry)
      beta-chain sequences of donkey and horse hemoglobins are identical
    11. 1474071Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46511] (11 PDB entries)
    12. 1474090Species Fish (Leiostomus xanthurus) [TaxId:59837] [46514] (1 PDB entry)
    13. 1474092Species Graylag goose (Anser anser) [TaxId:8843] [68940] (1 PDB entry)
    14. 1474095Species Horse (Equus caballus) [TaxId:9796] [46504] (16 PDB entries)
    15. 1474117Species Houndshark (Mustelus griseus) [TaxId:89020] [46515] (2 PDB entries)
    16. 1474122Species Human (Homo sapiens) [TaxId:9606] [46501] (217 PDB entries)
      Uniprot P68871
    17. 1474558Species Human (Homo sapiens), delta-chain [TaxId:9606] [116750] (2 PDB entries)
      Uniprot P02042
    18. 1474563Species Human (Homo sapiens), embryonic gower II [TaxId:9606] [46503] (1 PDB entry)
    19. 1474566Species Human fetus (Homo sapiens), gamma-chain [TaxId:9606] [46502] (3 PDB entries)
    20. 1474573Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63441] (1 PDB entry)
    21. 1474576Species Mouse (Mus musculus) [TaxId:10090] [68939] (1 PDB entry)
    22. 1474579Species Pig (Sus scrofa) [TaxId:9823] [46507] (3 PDB entries)
    23. 1474588Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46510] (2 PDB entries)
    24. 1474592Species Yellow perch (Perca flavescens) [TaxId:8167] [116751] (4 PDB entries)
      Uniprot P83273; 86% sequence identity
  19. 1474601Hemoglobin, different isoforms [46524] (1 species)
  20. 1474605Hypothetical protein PA3967 [109628] (1 species)
  21. 1474608Lamprey globin [46518] (2 species)
    1. 1474609Species Lamprey (Lampetra fluviatilis) [TaxId:7748] [88966] (1 PDB entry)
    2. 1474622Species Sea lamprey (Petromyzon marinus) [TaxId:7757] [46519] (4 PDB entries)
  22. 1474648Leghemoglobin [46481] (2 species)
    1. 1474649Species Soybean (Glycine max), isoform A [TaxId:3847] [46483] (2 PDB entries)
    2. 1474654Species Yellow lupine (Lupinus luteus) [TaxId:3873] [46482] (17 PDB entries)
  23. 1474672Myoglobin [46469] (9 species)
    1. 1474673Species Asian elephant (Elephas maximus) [TaxId:9783] [46476] (1 PDB entry)
    2. 1474675Species Common seal (Phoca vitulina) [TaxId:9720] [46472] (1 PDB entry)
    3. 1474677Species Horse (Equus caballus) [TaxId:9796] [46474] (65 PDB entries)
    4. 1474746Species Human (Homo sapiens) [TaxId:9606] [46475] (1 PDB entry)
    5. 1474748Species Loggerhead sea turtle (Caretta caretta) [TaxId:8467] [46477] (2 PDB entries)
    6. 1474751Species Pig (Sus scrofa) [TaxId:9823] [46473] (17 PDB entries)
    7. 1474785Species Slug sea hare (Aplysia limacina) [TaxId:6502] [46471] (7 PDB entries)
    8. 1474793Species Sperm whale (Physeter catodon) [TaxId:9755] [46470] (239 PDB entries)
      Uniprot P02185
    9. 1475034Species Yellowfin tuna (Thunnus albacares) [TaxId:8236] [46478] (1 PDB entry)
  24. 1475036Neuroglobin [100978] (2 species)
    1. 1475037Species Human (Homo sapiens) [TaxId:9606] [100979] (2 PDB entries)
    2. 1475043Species Mouse (Mus musculus) [TaxId:10090] [109625] (12 PDB entries)
      Uniprot Q9ER97
  25. 1475056Non-symbiotic plant hemoglobin [46484] (1 species)
  26. 1475064Trematode hemoglobin/myoglobin [63438] (1 species)
  27. 1475069automated matches [190359] (38 species)
    not a true protein
    1. 1475070Species Amphitrite ornata [TaxId:129555] [189339] (3 PDB entries)
    2. 1475077Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [187427] (31 PDB entries)
    3. 1475146Species Barley (Hordeum vulgare) [TaxId:4513] [187359] (1 PDB entry)
    4. 1475155Species Brycon cephalus [TaxId:126311] [188621] (1 PDB entry)
    5. 1475160Species Buffalo (Bubalus bubalis) [TaxId:89462] [188864] (1 PDB entry)
    6. 1475165Species Camel (Camelus dromedarius) [TaxId:9838] [189249] (1 PDB entry)
    7. 1475170Species Cat (Felis catus) [TaxId:9685] [188888] (4 PDB entries)
    8. 1475195Species Coturnix japonica [TaxId:93934] [189557] (1 PDB entry)
    9. 1475200Species Domestic pigeon (Columba livia) [TaxId:8932] [188616] (2 PDB entries)
    10. 1475213Species Dromaius novaehollandiae [TaxId:8790] [258618] (1 PDB entry)
    11. 1475218Species Duck (Anas platyrhynchos) [TaxId:8839] [189063] (1 PDB entry)
    12. 1475221Species Dusicyon thous [TaxId:9620] [187446] (1 PDB entry)
    13. 1475223Species Eleginops maclovinus [TaxId:56733] [193401] (1 PDB entry)
    14. 1475228Species Escherichia coli [TaxId:562] [196657] (1 PDB entry)
    15. 1475231Species Goat (Capra hircus) [TaxId:9925] [188635] (3 PDB entries)
    16. 1475248Species Guinea pig (Cavia porcellus) [TaxId:10141] [189281] (2 PDB entries)
    17. 1475253Species Human (Homo sapiens) [TaxId:9606] [188371] (5 PDB entries)
    18. 1475270Species Isurus oxyrinchus [TaxId:57983] [189618] (1 PDB entry)
    19. 1475275Species Lepus europaeus [TaxId:9983] [189630] (1 PDB entry)
    20. 1475280Species Maize (Zea mays) [TaxId:76912] [188014] (1 PDB entry)
    21. 1475285Species Mammuthus primigenius [TaxId:37349] [194337] (3 PDB entries)
    22. 1475294Species Mouse (Mus musculus) [TaxId:10090] [187190] (2 PDB entries)
    23. 1475300Species Norway rat (Rattus norvegicus) [TaxId:10116] [188924] (2 PDB entries)
    24. 1475307Species Parasponia andersonii [TaxId:3476] [193708] (1 PDB entry)
    25. 1475310Species Peromyscus maniculatus [TaxId:10042] [196779] (1 PDB entry)
    26. 1475312Species Podocnemis unifilis [TaxId:227871] [189922] (2 PDB entries)
    27. 1475317Species Psittacula krameri [TaxId:9228] [255724] (1 PDB entry)
    28. 1475320Species Pteropus giganteus [TaxId:143291] [188768] (1 PDB entry)
    29. 1475323Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [188592] (1 PDB entry)
    30. 1475328Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [188309] (2 PDB entries)
    31. 1475337Species Sheep (Ovis aries) [TaxId:9940] [188522] (1 PDB entry)
    32. 1475342Species Sperm whale (Physeter catodon) [TaxId:9755] [188226] (4 PDB entries)
    33. 1475347Species Struthio camelus [TaxId:8801] [188835] (1 PDB entry)
    34. 1475352Species Thunnus atlanticus [TaxId:48168] [187921] (8 PDB entries)
    35. 1475361Species Thunnus orientalis [TaxId:8238] [187933] (1 PDB entry)
    36. 1475363Species Trema tomentosa [TaxId:3480] [196352] (1 PDB entry)
    37. 1475366Species Turkey (Meleagris gallopavo) [TaxId:9103] [189160] (2 PDB entries)
    38. 1475375Species Yellow perch (Perca flavescens) [TaxId:8167] [188574] (3 PDB entries)

More info for Family a.1.1.2: Globins

Timeline for Family a.1.1.2: Globins: