Lineage for Family a.1.1.2: Globins

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2685878Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 2685879Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 2685963Family a.1.1.2: Globins [46463] (27 proteins)
    Heme-binding protein

Proteins:

  1. 2685964Ascaris hemoglobin, domain 1 [46520] (1 species)
  2. 2685967Bacterial dimeric hemoglobin [46526] (1 species)
  3. 2685981Chimeric hemoglobin beta-alpha [46516] (1 species)
  4. 2685987Cytoglobin [109626] (1 species)
  5. 2686003Dehaloperoxidase [46530] (1 species)
  6. 2686069Erythrocruorin [46479] (1 species)
  7. 2686075Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 [116758] (1 species)
  8. 2686083Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) [116754] (1 species)
  9. 2686091Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) [116756] (1 species)
  10. 2686099Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A) [116752] (1 species)
  11. 2686107Flavohemoglobin, N-terminal domain [46528] (2 species)
    1. 2686108Species Alcaligenes eutrophus [TaxId:106590] [46529] (1 PDB entry)
    2. 2686111Species Escherichia coli [TaxId:562] [74663] (1 PDB entry)
  12. 2686113Glycera globin [46467] (1 species)
  13. 2686123Hagfish hemoglobin [68941] (1 species)
  14. 2686131Heme-based aerotactic transducer HemAT, sensor domain [100980] (1 species)
  15. 2686137Hemoglobin [46522] (1 species)
  16. 2686141Hemoglobin I [46464] (2 species)
    1. 2686142Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [46465] (38 PDB entries)
    2. 2686233Species Clam (Lucina pectinata) [TaxId:244486] [46466] (4 PDB entries)
  17. 2686238Hemoglobin, alpha-chain [46486] (24 species)
    1. 2686239Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100976] (3 PDB entries)
      Uniprot P83134
    2. 2686243Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46497] (7 PDB entries)
    3. 2686255Species Bar-headed goose (Anser indicus) [TaxId:8846] [46493] (4 PDB entries)
    4. 2686263Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109623] (3 PDB entries)
      Uniprot Q8AYM0
    5. 2686270Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46496] (2 PDB entries)
    6. 2686273Species Chicken (Gallus gallus) [TaxId:9031] [46492] (1 PDB entry)
    7. 2686276Species Cow (Bos taurus) [TaxId:9913] [46490] (12 PDB entries)
    8. 2686301Species Deer (Odocoileus virginianus) [TaxId:9874] [46489] (1 PDB entry)
    9. 2686304Species Dog (Canis familiaris) [TaxId:9615] [189534] (3 PDB entries)
    10. 2686309Species Donkey (Equus asinus) [TaxId:9793] [158217] (1 PDB entry)
      Uniprot P01959 1-141
      beta-chain sequences of donkey and horse hemoglobins are identical
    11. 2686311Species Dusicyon thous [TaxId:9620] [186966] (1 PDB entry)
    12. 2686315Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46495] (12 PDB entries)
    13. 2686335Species Fish (Leiostomus xanthurus) [TaxId:59837] [46498] (1 PDB entry)
    14. 2686337Species Graylag goose (Anser anser) [TaxId:8843] [68938] (1 PDB entry)
    15. 2686340Species Horse (Equus caballus) [TaxId:9796] [46488] (19 PDB entries)
    16. 2686366Species Houndshark (Mustelus griseus) [TaxId:89020] [46499] (2 PDB entries)
    17. 2686371Species Human (Homo sapiens) [TaxId:9606] [46487] (291 PDB entries)
      Uniprot P69905 P01922 P01934 P01935
    18. 2686972Species Human (Homo sapiens), zeta isoform [TaxId:9606] [68937] (2 PDB entries)
    19. 2686978Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63440] (1 PDB entry)
    20. 2686981Species Ochotona princeps [TaxId:9978] [326613] (1 PDB entry)
    21. 2686983Species Peromyscus maniculatus [TaxId:10042] [224840] (1 PDB entry)
    22. 2686985Species Pig (Sus scrofa) [TaxId:9823] [46491] (3 PDB entries)
    23. 2686994Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46494] (2 PDB entries)
    24. 2686998Species Yellow perch (Perca flavescens) [TaxId:8167] [116749] (1 PDB entry)
      Uniprot P83270; 78% sequence identity
  18. 2687001Hemoglobin, beta-chain [46500] (26 species)
    1. 2687002Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100977] (3 PDB entries)
      Uniprot P83133
    2. 2687006Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46513] (7 PDB entries)
    3. 2687018Species Bar-headed goose (Anser indicus) [TaxId:8846] [46509] (4 PDB entries)
    4. 2687026Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109624] (3 PDB entries)
      Uniprot Q8AYM1
    5. 2687033Species Canis lupus [TaxId:9615] [311319] (1 PDB entry)
    6. 2687035Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46512] (2 PDB entries)
    7. 2687038Species Chicken (Gallus gallus) [TaxId:9031] [46508] (1 PDB entry)
    8. 2687041Species Cow (Bos taurus) [TaxId:9913] [46506] (13 PDB entries)
    9. 2687068Species Deer (Odocoileus virginianus) [TaxId:9874] [46505] (1 PDB entry)
    10. 2687071Species Dog (Canis familiaris) [TaxId:9615] [158218] (3 PDB entries)
    11. 2687077Species Donkey (Equus asinus) [TaxId:9793] [158216] (1 PDB entry)
      beta-chain sequences of donkey and horse hemoglobins are identical
    12. 2687079Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46511] (12 PDB entries)
    13. 2687099Species Fish (Leiostomus xanthurus) [TaxId:59837] [46514] (1 PDB entry)
    14. 2687101Species Graylag goose (Anser anser) [TaxId:8843] [68940] (1 PDB entry)
    15. 2687104Species Horse (Equus caballus) [TaxId:9796] [46504] (19 PDB entries)
    16. 2687130Species Houndshark (Mustelus griseus) [TaxId:89020] [46515] (2 PDB entries)
    17. 2687135Species Human (Homo sapiens) [TaxId:9606] [46501] (289 PDB entries)
      Uniprot P68871
    18. 2687734Species Human (Homo sapiens), delta-chain [TaxId:9606] [116750] (2 PDB entries)
      Uniprot P02042
    19. 2687739Species Human (Homo sapiens), embryonic gower II [TaxId:9606] [46503] (1 PDB entry)
    20. 2687742Species Human fetus (Homo sapiens), gamma-chain [TaxId:9606] [46502] (3 PDB entries)
    21. 2687749Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63441] (1 PDB entry)
    22. 2687752Species Mouse (Mus musculus) [TaxId:10090] [68939] (1 PDB entry)
    23. 2687755Species Ochotona princeps [TaxId:9978] [346154] (1 PDB entry)
    24. 2687757Species Pig (Sus scrofa) [TaxId:9823] [46507] (3 PDB entries)
    25. 2687766Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46510] (2 PDB entries)
    26. 2687770Species Yellow perch (Perca flavescens) [TaxId:8167] [116751] (4 PDB entries)
      Uniprot P83273; 86% sequence identity
  19. 2687779Hemoglobin, different isoforms [46524] (1 species)
  20. 2687783Hypothetical protein PA3967 [109628] (1 species)
  21. 2687786Lamprey globin [46518] (2 species)
    1. 2687787Species Lamprey (Lampetra fluviatilis) [TaxId:7748] [88966] (1 PDB entry)
    2. 2687800Species Sea lamprey (Petromyzon marinus) [TaxId:7757] [46519] (4 PDB entries)
  22. 2687826Leghemoglobin [46481] (2 species)
    1. 2687827Species Soybean (Glycine max), isoform A [TaxId:3847] [46483] (2 PDB entries)
    2. 2687832Species Yellow lupine (Lupinus luteus) [TaxId:3873] [46482] (17 PDB entries)
  23. 2687850Myoglobin [46469] (11 species)
    1. 2687851Species Asian elephant (Elephas maximus) [TaxId:9783] [46476] (1 PDB entry)
    2. 2687853Species Common seal (Phoca vitulina) [TaxId:9720] [46472] (1 PDB entry)
    3. 2687855Species Horse (Equus caballus) [TaxId:9796] [46474] (96 PDB entries)
    4. 2687970Species Human (Homo sapiens) [TaxId:9606] [46475] (1 PDB entry)
    5. 2687972Species Kogia sima [TaxId:9752] [342029] (1 PDB entry)
    6. 2687975Species Loggerhead sea turtle (Caretta caretta) [TaxId:8467] [46477] (2 PDB entries)
    7. 2687978Species Pig (Sus scrofa) [TaxId:9823] [46473] (17 PDB entries)
    8. 2688012Species Slug sea hare (Aplysia limacina) [TaxId:6502] [46471] (7 PDB entries)
    9. 2688020Species Sperm whale (Physeter catodon) [TaxId:9755] [46470] (316 PDB entries)
      Uniprot P02185
    10. 2688339Species Yellowfin tuna (Thunnus albacares) [TaxId:8236] [46478] (1 PDB entry)
    11. 3084756Species Mirounga angustirostris [TaxId:9716] [421073] (1 PDB entry)
  24. 2688341Neuroglobin [100978] (2 species)
    1. 2688342Species Human (Homo sapiens) [TaxId:9606] [100979] (2 PDB entries)
    2. 2688349Species Mouse (Mus musculus) [TaxId:10090] [109625] (38 PDB entries)
      Uniprot Q9ER97
  25. 2688388Non-symbiotic plant hemoglobin [46484] (1 species)
  26. 2688396Trematode hemoglobin/myoglobin [63438] (1 species)
  27. 2688401automated matches [190359] (43 species)
    not a true protein
    1. 2688402Species Acipenser persicus [TaxId:61968] [333390] (1 PDB entry)
    2. 2688404Species Amphitrite ornata [TaxId:129555] [189339] (46 PDB entries)
    3. 2688487Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [187427] (32 PDB entries)
    4. 2688560Species Atlantic cod (Gadus morhua) [TaxId:8049] [373131] (1 PDB entry)
    5. 2688569Species Barley (Hordeum vulgare) [TaxId:4513] [187359] (1 PDB entry)
    6. 2688578Species Brycon cephalus [TaxId:126311] [188621] (1 PDB entry)
    7. 2688583Species Buffalo (Bubalus bubalis) [TaxId:89462] [188864] (1 PDB entry)
    8. 2688588Species Camel (Camelus dromedarius) [TaxId:9838] [189249] (1 PDB entry)
    9. 2688593Species Cat (Felis catus) [TaxId:9685] [188888] (4 PDB entries)
    10. 2688618Species Coturnix japonica [TaxId:93934] [189557] (1 PDB entry)
    11. 2688623Species Cow (Bos taurus) [TaxId:9913] [361141] (1 PDB entry)
    12. 2688626Species Domestic pigeon (Columba livia) [TaxId:8932] [188616] (2 PDB entries)
    13. 2688639Species Dromaius novaehollandiae [TaxId:8790] [258618] (1 PDB entry)
    14. 2688644Species Duck (Anas platyrhynchos) [TaxId:8839] [189063] (1 PDB entry)
    15. 2688647Species Dusicyon thous [TaxId:9620] [187446] (1 PDB entry)
    16. 2688649Species Eleginops maclovinus [TaxId:56733] [193401] (2 PDB entries)
    17. 2688656Species Escherichia coli [TaxId:562] [196657] (1 PDB entry)
    18. 2688659Species Glossoscolex paulistus [TaxId:1046353] [273742] (1 PDB entry)
    19. 2688661Species Goat (Capra hircus) [TaxId:9925] [188635] (3 PDB entries)
    20. 2688678Species Guinea pig (Cavia porcellus) [TaxId:10141] [189281] (2 PDB entries)
    21. 2688683Species Helogale parvula [TaxId:210647] [277372] (2 PDB entries)
    22. 2688690Species Horse (Equus caballus) [TaxId:9796] [348950] (1 PDB entry)
    23. 2688692Species Human (Homo sapiens) [TaxId:9606] [188371] (10 PDB entries)
    24. 2688717Species Isurus oxyrinchus [TaxId:57983] [189618] (1 PDB entry)
    25. 2688722Species Lepus europaeus [TaxId:9983] [189630] (1 PDB entry)
    26. 2688727Species Maize (Zea mays) [TaxId:76912] [188014] (1 PDB entry)
    27. 2688732Species Mammuthus primigenius [TaxId:37349] [194337] (3 PDB entries)
    28. 2688741Species Mouse (Mus musculus) [TaxId:10090] [187190] (2 PDB entries)
    29. 2688747Species Norway rat (Rattus norvegicus) [TaxId:10116] [188924] (2 PDB entries)
    30. 2688754Species Parasponia andersonii [TaxId:3476] [193708] (1 PDB entry)
    31. 2688757Species Peromyscus maniculatus [TaxId:10042] [196779] (2 PDB entries)
    32. 2688767Species Podocnemis unifilis [TaxId:227871] [189922] (2 PDB entries)
    33. 2688772Species Psittacula krameri [TaxId:9228] [255724] (1 PDB entry)
    34. 2688775Species Pteropus giganteus [TaxId:143291] [188768] (1 PDB entry)
    35. 2688778Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [188592] (1 PDB entry)
    36. 2688783Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [188309] (2 PDB entries)
    37. 2688792Species Sheep (Ovis aries) [TaxId:9940] [188522] (1 PDB entry)
    38. 2688797Species Sperm whale (Physeter catodon) [TaxId:9755] [188226] (7 PDB entries)
    39. 2688807Species Struthio camelus [TaxId:8801] [188835] (1 PDB entry)
    40. 2688812Species Thunnus atlanticus [TaxId:48168] [187921] (9 PDB entries)
    41. 2688822Species Trema tomentosa [TaxId:3480] [196352] (1 PDB entry)
    42. 2688825Species Turkey (Meleagris gallopavo) [TaxId:9103] [189160] (4 PDB entries)
    43. 2688842Species Yellow perch (Perca flavescens) [TaxId:8167] [188574] (3 PDB entries)

More info for Family a.1.1.2: Globins

Timeline for Family a.1.1.2: Globins: