Lineage for Species: Amphitrite ornata [TaxId: 129555]

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2685878Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 2685879Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 2685963Family a.1.1.2: Globins [46463] (27 proteins)
    Heme-binding protein
  6. 2688401Protein automated matches [190359] (43 species)
    not a true protein
  7. 2688404Species Amphitrite ornata [TaxId:129555] [189339] (47 PDB entries)

PDB entries in Species: Amphitrite ornata [TaxId: 129555]:

  1. Domain(s) for 3ixf:
    1. 2688413Domain d3ixfa_: 3ixf A: [178667]
      automated match to d1ew6a_
      complexed with hem, oxy, so4
    2. 2688414Domain d3ixfb_: 3ixf B: [178668]
      automated match to d1ew6a_
      complexed with hem, oxy, so4
  2. Domain(s) for 4jac:
    1. 2688457Domain d4jaca_: 4jac A: [229253]
      automated match to d3lb2a_
      complexed with azi, hem, so4
    2. 2688458Domain d4jacb_: 4jac B: [229254]
      automated match to d3lb2a_
      complexed with azi, hem, so4
  3. Domain(s) for 4kn3:
    1. 2688463Domain d4kn3a_: 4kn3 A: [227753]
      automated match to d3lb2a_
      complexed with hem, so4, t6c; mutant
    2. 2688464Domain d4kn3b_: 4kn3 B: [230076]
      automated match to d4kn3a_
      complexed with hem, so4, t6c; mutant
  4. Domain(s) for 5chq:
    1. 2688477Domain d5chqa_: 5chq A: [316264]
      automated match to d3ixfa_
      complexed with gol, hem, npo, so4
    2. 2688478Domain d5chqb_: 5chq B: [316237]
      automated match to d3ixfa_
      complexed with gol, hem, npo, so4
  5. Domain(s) for 5chr:
    1. 2688483Domain d5chra_: 5chr A: [316217]
      automated match to d3ixfa_
      complexed with 4nc, gol, hem, oxy, so4
    2. 2688484Domain d5chrb_: 5chr B: [316218]
      automated match to d3ixfa_
      complexed with 4nc, gol, hem, oxy, so4
  6. Domain(s) for 5k1l:
    1. 2688407Domain d5k1la_: 5k1l A: [335132]
      automated match to d4kn3a_
      complexed with bzi, hem, so4
    2. 2688408Domain d5k1lb_: 5k1l B: [335154]
      automated match to d4kn3a_
      complexed with bzi, hem, so4
  7. Domain(s) for 5lk9:
    1. 2688409Domain d5lk9a_: 5lk9 A: [337191]
      automated match to d4kn3a_
      complexed with gol, hem, lz1, so4
    2. 2688410Domain d5lk9b_: 5lk9 B: [337172]
      automated match to d4kn3a_
      complexed with gol, hem, lz1, so4
  8. Domain(s) for 5lkv:
    1. 2688405Domain d5lkva_: 5lkv A: [337944]
      automated match to d4kn3a_
      complexed with gol, hem, imd, so4
    2. 2688406Domain d5lkvb_: 5lkv B: [337890]
      automated match to d4kn3a_
      complexed with gol, hem, imd, so4
  9. Domain(s) for 5llz:
    1. 2688411Domain d5llza_: 5llz A: [338075]
      automated match to d4kn3a_
      complexed with 0ct, hem, so4
    2. 2688412Domain d5llzb_: 5llz B: [337904]
      automated match to d4kn3a_
      complexed with 0ct, hem, so4
  10. Domain(s) for 5v5j:
    1. 2688467Domain d5v5ja_: 5v5j A: [347908]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4
    2. 2688468Domain d5v5jb_: 5v5j B: [347929]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4
  11. Domain(s) for 5v5q:
    1. 2688481Domain d5v5qa_: 5v5q A: [347827]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
    2. 2688482Domain d5v5qb_: 5v5q B: [347854]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
  12. Domain(s) for 5vlx:
    1. 2688437Domain d5vlxa_: 5vlx A: [347920]
      automated match to d5lkva_
      complexed with gol, hem, so4; mutant
    2. 2688438Domain d5vlxb_: 5vlx B: [347932]
      automated match to d5lkva_
      complexed with gol, hem, so4; mutant
  13. Domain(s) for 5vts:
    1. 2688439Domain d5vtsa_: 5vts A: [352574]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
    2. 2688440Domain d5vtsb_: 5vts B: [352679]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
  14. Domain(s) for 5vtt:
    1. 2688479Domain d5vtta_: 5vtt A: [352564]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
    2. 2688480Domain d5vttb_: 5vtt B: [352608]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
  15. Domain(s) for 6ch5:
    1. 2688447Domain d6ch5a_: 6ch5 A: [362130]
      automated match to d5lkva_
      complexed with f0m, gol, hem, peg, so4
    2. 2688448Domain d6ch5b_: 6ch5 B: [362053]
      automated match to d5lkva_
      complexed with f0m, gol, hem, peg, so4
  16. Domain(s) for 6ch6:
    1. 2688453Domain d6ch6a_: 6ch6 A: [362094]
      automated match to d5lkva_
      complexed with f0j, gol, hem, so4
    2. 2688454Domain d6ch6b_: 6ch6 B: [362044]
      automated match to d5lkva_
      complexed with f0j, gol, hem, so4
  17. Domain(s) for 6cke:
    1. 2688423Domain d6ckea_: 6cke A: [365662]
      automated match to d5lkva_
      complexed with 3z7, hem, so4
    2. 2688424Domain d6ckeb_: 6cke B: [365617]
      automated match to d5lkva_
      complexed with 3z7, hem, so4
  18. Domain(s) for 6co5:
    1. 2688449Domain d6co5a_: 6co5 A: [366380]
      automated match to d5lkva_
      complexed with f81, hem, so4
    2. 2688450Domain d6co5b_: 6co5 B: [366379]
      automated match to d5lkva_
      complexed with f81, hem, so4
  19. Domain(s) for 6cre:
    1. 2688441Domain d6crea_: 6cre A: [366433]
      automated match to d5lkva_
      complexed with f9g, hem, so4
    2. 2688442Domain d6creb_: 6cre B: [366366]
      automated match to d5lkva_
      complexed with f9g, hem, so4
  20. Domain(s) for 6i6g:
    1. 2688475Domain d6i6ga_: 6i6g A: [377023]
      automated match to d5lkva_
      complexed with h4n, hem, so4
    2. 2688476Domain d6i6gb_: 6i6g B: [377021]
      automated match to d5lkva_
      complexed with h4n, hem, so4
  21. Domain(s) for 6i7f:
    1. 2688473Domain d6i7fa_: 6i7f A: [377022]
      automated match to d5lkva_
      complexed with 5jc, hem, so4
    2. 2688474Domain d6i7fb_: 6i7f B: [377029]
      automated match to d5lkva_
      complexed with 5jc, hem, so4
  22. Domain(s) for 6ong:
    1. 2688429Domain d6onga_: 6ong A: [373996]
      automated match to d5lkva_
      complexed with edo, hem, mwm, so4
    2. 2688430Domain d6ongb_: 6ong B: [374033]
      automated match to d5lkva_
      complexed with edo, hem, mwm, so4
  23. Domain(s) for 6onk:
    1. 2688435Domain d6onka_: 6onk A: [373992]
      automated match to d5lkva_
      complexed with edo, hem, mzg, so4
    2. 2688436Domain d6onkb_: 6onk B: [373990]
      automated match to d5lkva_
      complexed with edo, hem, mzg, so4
  24. Domain(s) for 6onr:
    1. 2688419Domain d6onra_: 6onr A: [374660]
      automated match to d5lkva_
      complexed with edo, hem, n0d, peg, so4
    2. 2688420Domain d6onrb_: 6onr B: [374659]
      automated match to d5lkva_
      complexed with edo, hem, n0d, peg, so4
  25. Domain(s) for 6onx:
    1. 2688455Domain d6onxa_: 6onx A: [374667]
      automated match to d5lkva_
      complexed with edo, hem, mwj, peg, so4
    2. 2688456Domain d6onxb_: 6onx B: [374657]
      automated match to d5lkva_
      complexed with edo, hem, mwj, peg, so4
  26. Domain(s) for 6onz:
    1. 2688471Domain d6onza_: 6onz A: [373988]
      automated match to d5lkva_
      complexed with edo, hem, myj, so4
    2. 2688472Domain d6onzb_: 6onz B: [373985]
      automated match to d5lkva_
      complexed with edo, hem, myj, so4
  27. Domain(s) for 6oo1:
    1. 2688425Domain d6oo1a_: 6oo1 A: [391141]
      automated match to d5lkva_
      complexed with edo, hem, jz0, so4
    2. 2688426Domain d6oo1b_: 6oo1 B: [391140]
      automated match to d5lkva_
      complexed with edo, hem, jz0, so4
  28. Domain(s) for 6oo6:
    1. 2688485Domain d6oo6a_: 6oo6 A: [374663]
      automated match to d5lkva_
      complexed with edo, hem, pcr, so4
    2. 2688486Domain d6oo6b_: 6oo6 B: [374664]
      automated match to d5lkva_
      complexed with edo, hem, pcr, so4
  29. Domain(s) for 6oo8:
    1. 2688469Domain d6oo8a_: 6oo8 A: [384664]
      automated match to d5lkva_
      complexed with edo, hem, pci, so4
    2. 2688470Domain d6oo8b_: 6oo8 B: [384729]
      automated match to d5lkva_
      complexed with edo, hem, pci, so4
  30. Domain(s) for 6vd3:
    1. 2688431Domain d6vd3a_: 6vd3 A: [397729]
      automated match to d5lkva_
      complexed with bml, edo, mh0, so4
    2. 2688432Domain d6vd3b_: 6vd3 B: [397727]
      automated match to d5lkva_
      complexed with bml, edo, mh0, so4
  31. Domain(s) for 6vd4:
    1. 2688451Domain d6vd4a_: 6vd4 A: [397798]
      automated match to d5lkva_
      complexed with edo, mh0, mwj, so4
    2. 2688452Domain d6vd4b_: 6vd4 B: [397874]
      automated match to d5lkva_
      complexed with edo, mh0, mwj, so4
  32. Domain(s) for 6vd5:
    1. 2688427Domain d6vd5a_: 6vd5 A: [397822]
      automated match to d5lkva_
      complexed with edo, mh0, so4, t6c
    2. 2688428Domain d6vd5b_: 6vd5 B: [397806]
      automated match to d5lkva_
      complexed with edo, mh0, so4, t6c
  33. Domain(s) for 6vd6:
    1. 2688421Domain d6vd6a_: 6vd6 A: [397833]
      automated match to d5lkva_
      complexed with edo, mh0, npo, so4
    2. 2688422Domain d6vd6b_: 6vd6 B: [397805]
      automated match to d5lkva_
      complexed with edo, mh0, npo, so4
  34. Domain(s) for 6vdr:
    1. 2688445Domain d6vdra_: 6vdr A: [397773]
      automated match to d5lkva_
      complexed with bml, edo, fde, so4
    2. 2688446Domain d6vdrb_: 6vdr B: [397794]
      automated match to d5lkva_
      complexed with bml, edo, fde, so4
  35. Domain(s) for 6vds:
    1. 2688465Domain d6vdsa_: 6vds A: [397711]
      automated match to d5lkva_
      complexed with edo, fde, mwj, so4
    2. 2688466Domain d6vdsb_: 6vds B: [397759]
      automated match to d5lkva_
      complexed with edo, fde, mwj, so4
  36. Domain(s) for 6vdt:
    1. 2688459Domain d6vdta_: 6vdt A: [397826]
      automated match to d5lkva_
      complexed with edo, fde, npo, peg, so4
    2. 2688460Domain d6vdtb_: 6vdt B: [397837]
      automated match to d5lkva_
      complexed with edo, fde, npo, peg, so4
  37. Domain(s) for 6vdu:
    1. 2688461Domain d6vdua_: 6vdu A: [397848]
      automated match to d5lkva_
      complexed with edo, fde, peg, so4, t6c
    2. 2688462Domain d6vdub_: 6vdu B: [397802]
      automated match to d5lkva_
      complexed with edo, fde, peg, so4, t6c
  38. Domain(s) for 6vdv:
    1. 2688443Domain d6vdva_: 6vdv A: [397845]
      automated match to d5lkva_
      complexed with bml, edo, mnr, so4
    2. 2688444Domain d6vdvb_: 6vdv B: [397839]
      automated match to d5lkva_
      complexed with bml, edo, mnr, so4
  39. Domain(s) for 6vdw:
    1. 2688415Domain d6vdwa_: 6vdw A: [397785]
      automated match to d5lkva_
      complexed with edo, mnr, npo, peg, so4
    2. 2688416Domain d6vdwb_: 6vdw B: [397786]
      automated match to d5lkva_
      complexed with edo, mnr, npo, peg, so4
  40. Domain(s) for 6vdx:
    1. 2688417Domain d6vdxa_: 6vdx A: [397781]
      automated match to d5lkva_
      complexed with edo, mnr, peg, so4, t6c
    2. 2688418Domain d6vdxb_: 6vdx B: [397811]
      automated match to d5lkva_
      complexed with edo, mnr, peg, so4, t6c
  41. Domain(s) for 6vdy:
    1. 2688433Domain d6vdya_: 6vdy A: [397783]
      automated match to d5lkva_
      complexed with edo, hem, so4, t6c
    2. 2688434Domain d6vdyb_: 6vdy B: [397716]
      automated match to d5lkva_
      complexed with edo, hem, so4, t6c
  42. Domain(s) for 7acp:
    1. 3083931Domain d7acpb_: 7acp B: [420248]
      automated match to d5lkva_
      complexed with hem, so4
    2. 3083945Domain d7acpa_: 7acp A: [420262]
      automated match to d5lkva_
      complexed with hem, so4
  43. Domain(s) for 7adf:
    1. 3083877Domain d7adfa_: 7adf A: [420194]
      automated match to d5lkva_
      complexed with hem, so4
    2. 3083915Domain d7adfb_: 7adf B: [420232]
      automated match to d5lkva_
      complexed with hem, so4
  44. Domain(s) for 7adq:
    1. 3083889Domain d7adqa_: 7adq A: [420206]
      automated match to d5lkva_
      complexed with hem, so4
    2. 3083891Domain d7adqb_: 7adq B: [420208]
      automated match to d5lkva_
      complexed with hem, so4
  45. Domain(s) for 7adx:
    1. 3083893Domain d7adxb_: 7adx B: [420210]
      automated match to d5lkva_
      complexed with hem, oxy, so4
    2. 3083917Domain d7adxa_: 7adx A: [420234]
      automated match to d5lkva_
      complexed with hem, oxy, so4
  46. Domain(s) for 7jor:
    1. 3085583Domain d7jora_: 7jor A: [421900]
      automated match to d5lkva_
      complexed with hem, pg0
    2. 3085591Domain d7jorb_: 7jor B: [421908]
      automated match to d5lkva_
      complexed with hem, pg0
  47. Domain(s) for 7sjd:
    1. 3087204Domain d7sjda_: 7sjd A: [423521]
      automated match to d5lkva_
      complexed with 9lr, gol, hem, so4
    2. 3087227Domain d7sjdb_: 7sjd B: [423544]
      automated match to d5lkva_
      complexed with 9lr, gol, hem, so4

More info for Species Amphitrite ornata [TaxId:129555] from a.1.1.2 automated matches

Timeline for Species Amphitrite ornata [TaxId:129555] from a.1.1.2 automated matches: