Lineage for Species: Amphitrite ornata [TaxId: 129555]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2299347Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 2299348Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 2299432Family a.1.1.2: Globins [46463] (27 protein domains)
    Heme-binding protein
  6. 2301593Protein automated matches [190359] (42 species)
    not a true protein
  7. 2301596Species Amphitrite ornata [TaxId:129555] [189339] (12 PDB entries)

PDB entries in Species: Amphitrite ornata [TaxId: 129555]:

  1. Domain(s) for 3ixf:
    1. 2301605Domain d3ixfa_: 3ixf A: [178667]
      automated match to d1ew6a_
      complexed with hem, oxy, so4
    2. 2301606Domain d3ixfb_: 3ixf B: [178668]
      automated match to d1ew6a_
      complexed with hem, oxy, so4
  2. Domain(s) for 4jac:
    1. 2301607Domain d4jaca_: 4jac A: [229253]
      automated match to d3lb2a_
      complexed with azi, hem, so4
    2. 2301608Domain d4jacb_: 4jac B: [229254]
      automated match to d3lb2a_
      complexed with azi, hem, so4
  3. Domain(s) for 4kn3:
    1. 2301609Domain d4kn3a_: 4kn3 A: [227753]
      automated match to d3lb2a_
      complexed with hem, so4, t6c; mutant
    2. 2301610Domain d4kn3b_: 4kn3 B: [230076]
      automated match to d4kn3a_
      complexed with hem, so4, t6c; mutant
  4. Domain(s) for 5chq:
    1. 2301611Domain d5chqa_: 5chq A: [316264]
      automated match to d3ixfa_
      complexed with gol, hem, npo, so4
    2. 2301612Domain d5chqb_: 5chq B: [316237]
      automated match to d3ixfa_
      complexed with gol, hem, npo, so4
  5. Domain(s) for 5chr:
    1. 2301613Domain d5chra_: 5chr A: [316217]
      automated match to d3ixfa_
      complexed with 4nc, gol, hem, oxy, so4
    2. 2301614Domain d5chrb_: 5chr B: [316218]
      automated match to d3ixfa_
      complexed with 4nc, gol, hem, oxy, so4
  6. Domain(s) for 5k1l:
    1. 2301599Domain d5k1la_: 5k1l A: [335132]
      automated match to d4kn3a_
      complexed with bzi, hem, so4
    2. 2301600Domain d5k1lb_: 5k1l B: [335154]
      automated match to d4kn3a_
      complexed with bzi, hem, so4
  7. Domain(s) for 5lk9:
    1. 2301601Domain d5lk9a_: 5lk9 A: [337191]
      automated match to d4kn3a_
      complexed with gol, hem, lz1, so4
    2. 2301602Domain d5lk9b_: 5lk9 B: [337172]
      automated match to d4kn3a_
      complexed with gol, hem, lz1, so4
  8. Domain(s) for 5lkv:
    1. 2301597Domain d5lkva_: 5lkv A: [337944]
      automated match to d4kn3a_
      complexed with gol, hem, imd, so4
    2. 2301598Domain d5lkvb_: 5lkv B: [337890]
      automated match to d4kn3a_
      complexed with gol, hem, imd, so4
  9. Domain(s) for 5llz:
    1. 2301603Domain d5llza_: 5llz A: [338075]
      automated match to d4kn3a_
      complexed with 0ct, hem, so4
    2. 2301604Domain d5llzb_: 5llz B: [337904]
      automated match to d4kn3a_
      complexed with 0ct, hem, so4
  10. Domain(s) for 5v5j:
    1. 3047846Domain d5v5ja_: 5v5j A: [347908]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4
    2. 3047867Domain d5v5jb_: 5v5j B: [347929]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4
  11. Domain(s) for 5v5q:
    1. 3047765Domain d5v5qa_: 5v5q A: [347827]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
    2. 3047792Domain d5v5qb_: 5v5q B: [347854]
      automated match to d5lkva_
      complexed with gol, hem, oxy, so4; mutant
  12. Domain(s) for 5vlx:
    1. 3047858Domain d5vlxa_: 5vlx A: [347920]
      automated match to d5lkva_
      complexed with gol, hem, so4; mutant
    2. 3047870Domain d5vlxb_: 5vlx B: [347932]
      automated match to d5lkva_
      complexed with gol, hem, so4; mutant

More info for Species Amphitrite ornata [TaxId:129555] from a.1.1.2 automated matches

Timeline for Species Amphitrite ornata [TaxId:129555] from a.1.1.2 automated matches: