Lineage for Family a.1.1.2: Globins

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1253685Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1253686Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1253759Family a.1.1.2: Globins [46463] (27 proteins)
    Heme-binding protein

Proteins:

  1. 1253760Ascaris hemoglobin, domain 1 [46520] (1 species)
  2. 1253763Bacterial dimeric hemoglobin [46526] (1 species)
  3. 1253773Chimeric hemoglobin beta-alpha [46516] (1 species)
  4. 1253779Cytoglobin [109626] (1 species)
  5. 1253795Dehaloperoxidase [46530] (1 species)
  6. 1253857Erythrocruorin [46479] (1 species)
  7. 1253863Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 [116758] (1 species)
  8. 1253871Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B) [116754] (1 species)
  9. 1253879Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) [116756] (1 species)
  10. 1253887Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A) [116752] (1 species)
  11. 1253895Flavohemoglobin, N-terminal domain [46528] (2 species)
    1. 1253896Species Alcaligenes eutrophus [TaxId:106590] [46529] (1 PDB entry)
    2. 1253899Species Escherichia coli [TaxId:562] [74663] (1 PDB entry)
  12. 1253901Glycera globin [46467] (1 species)
  13. 1253911Hagfish hemoglobin [68941] (1 species)
  14. 1253919Heme-based aerotactic transducer HemAT, sensor domain [100980] (1 species)
  15. 1253925Hemoglobin [46522] (1 species)
  16. 1253929Hemoglobin I [46464] (2 species)
    1. 1253930Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [46465] (36 PDB entries)
    2. 1254017Species Clam (Lucina pectinata) [TaxId:244486] [46466] (4 PDB entries)
  17. 1254022Hemoglobin, alpha-chain [46486] (23 species)
    1. 1254023Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100976] (3 PDB entries)
      Uniprot P83134
    2. 1254027Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46497] (6 PDB entries)
    3. 1254037Species Bar-headed goose (Anser indicus) [TaxId:8846] [46493] (3 PDB entries)
    4. 1254044Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109623] (3 PDB entries)
      Uniprot Q8AYM0
    5. 1254051Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46496] (2 PDB entries)
    6. 1254054Species Chicken (Gallus gallus) [TaxId:9031] [46492] (1 PDB entry)
    7. 1254057Species Cow (Bos taurus) [TaxId:9913] [46490] (11 PDB entries)
    8. 1254080Species Deer (Odocoileus virginianus) [TaxId:9874] [46489] (1 PDB entry)
    9. 1254083Species Dog (Canis familiaris) [TaxId:9615] [189534] (1 PDB entry)
    10. 1254085Species Donkey (Equus asinus) [TaxId:9793] [158217] (1 PDB entry)
      Uniprot P01959 1-141
      beta-chain sequences of donkey and horse hemoglobins are identical
    11. 1254087Species Dusicyon thous [TaxId:9620] [186966] (1 PDB entry)
    12. 1254091Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46495] (11 PDB entries)
    13. 1254110Species Fish (Leiostomus xanthurus) [TaxId:59837] [46498] (1 PDB entry)
    14. 1254112Species Graylag goose (Anser anser) [TaxId:8843] [68938] (1 PDB entry)
    15. 1254115Species Horse (Equus caballus) [TaxId:9796] [46488] (16 PDB entries)
    16. 1254137Species Houndshark (Mustelus griseus) [TaxId:89020] [46499] (2 PDB entries)
    17. 1254142Species Human (Homo sapiens) [TaxId:9606] [46487] (213 PDB entries)
      Uniprot P69905 P01922 P01934 P01935
    18. 1254573Species Human (Homo sapiens), zeta isoform [TaxId:9606] [68937] (2 PDB entries)
    19. 1254579Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63440] (1 PDB entry)
    20. 1254582Species Peromyscus maniculatus [TaxId:10042] [224840] (1 PDB entry)
    21. 1254584Species Pig (Sus scrofa) [TaxId:9823] [46491] (3 PDB entries)
    22. 1254593Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46494] (2 PDB entries)
    23. 1254597Species Yellow perch (Perca flavescens) [TaxId:8167] [116749] (1 PDB entry)
      Uniprot P83270; 78% sequence identity
  18. 1254600Hemoglobin, beta-chain [46500] (24 species)
    1. 1254601Species Aldabra giant tortoise (Geochelone gigantea) [TaxId:167804] [100977] (3 PDB entries)
      Uniprot P83133
    2. 1254605Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46513] (6 PDB entries)
    3. 1254615Species Bar-headed goose (Anser indicus) [TaxId:8846] [46509] (3 PDB entries)
    4. 1254622Species Bluefin tuna (Thunnus thynnus) [TaxId:8237] [109624] (3 PDB entries)
      Uniprot Q8AYM1
    5. 1254629Species Cartilaginous fish akaei (Dasyatis akajei) [TaxId:31902] [46512] (2 PDB entries)
    6. 1254632Species Chicken (Gallus gallus) [TaxId:9031] [46508] (1 PDB entry)
    7. 1254635Species Cow (Bos taurus) [TaxId:9913] [46506] (11 PDB entries)
    8. 1254658Species Deer (Odocoileus virginianus) [TaxId:9874] [46505] (1 PDB entry)
    9. 1254661Species Dog (Canis familiaris) [TaxId:9615] [158218] (2 PDB entries)
    10. 1254665Species Donkey (Equus asinus) [TaxId:9793] [158216] (1 PDB entry)
      beta-chain sequences of donkey and horse hemoglobins are identical
    11. 1254667Species Emerald rockcod (Pagothenia bernacchii) [TaxId:40690] [46511] (11 PDB entries)
    12. 1254686Species Fish (Leiostomus xanthurus) [TaxId:59837] [46514] (1 PDB entry)
    13. 1254688Species Graylag goose (Anser anser) [TaxId:8843] [68940] (1 PDB entry)
    14. 1254691Species Horse (Equus caballus) [TaxId:9796] [46504] (16 PDB entries)
    15. 1254713Species Houndshark (Mustelus griseus) [TaxId:89020] [46515] (2 PDB entries)
    16. 1254718Species Human (Homo sapiens) [TaxId:9606] [46501] (207 PDB entries)
      Uniprot P68871
    17. 1255138Species Human (Homo sapiens), delta-chain [TaxId:9606] [116750] (2 PDB entries)
      Uniprot P02042
    18. 1255143Species Human (Homo sapiens), embryonic gower II [TaxId:9606] [46503] (1 PDB entry)
    19. 1255146Species Human fetus (Homo sapiens), gamma-chain [TaxId:9606] [46502] (3 PDB entries)
    20. 1255153Species Maned wolf (Chrysocyon brachyurus) [TaxId:68728] [63441] (1 PDB entry)
    21. 1255156Species Mouse (Mus musculus) [TaxId:10090] [68939] (1 PDB entry)
    22. 1255159Species Pig (Sus scrofa) [TaxId:9823] [46507] (3 PDB entries)
    23. 1255167Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [46510] (2 PDB entries)
    24. 1255171Species Yellow perch (Perca flavescens) [TaxId:8167] [116751] (4 PDB entries)
      Uniprot P83273; 86% sequence identity
  19. 1255180Hemoglobin, different isoforms [46524] (1 species)
  20. 1255184Hypothetical protein PA3967 [109628] (1 species)
  21. 1255187Lamprey globin [46518] (2 species)
    1. 1255188Species Lamprey (Lampetra fluviatilis) [TaxId:7748] [88966] (1 PDB entry)
    2. 1255201Species Sea lamprey (Petromyzon marinus) [TaxId:7757] [46519] (4 PDB entries)
  22. 1255227Leghemoglobin [46481] (2 species)
    1. 1255228Species Soybean (Glycine max), isoform A [TaxId:3847] [46483] (2 PDB entries)
    2. 1255233Species Yellow lupine (Lupinus luteus) [TaxId:3873] [46482] (17 PDB entries)
  23. 1255251Myoglobin [46469] (9 species)
    1. 1255252Species Asian elephant (Elephas maximus) [TaxId:9783] [46476] (1 PDB entry)
    2. 1255254Species Common seal (Phoca vitulina) [TaxId:9720] [46472] (1 PDB entry)
    3. 1255256Species Horse (Equus caballus) [TaxId:9796] [46474] (62 PDB entries)
    4. 1255321Species Human (Homo sapiens) [TaxId:9606] [46475] (1 PDB entry)
    5. 1255323Species Loggerhead sea turtle (Caretta caretta) [TaxId:8467] [46477] (2 PDB entries)
    6. 1255326Species Pig (Sus scrofa) [TaxId:9823] [46473] (17 PDB entries)
    7. 1255360Species Slug sea hare (Aplysia limacina) [TaxId:6502] [46471] (7 PDB entries)
    8. 1255368Species Sperm whale (Physeter catodon) [TaxId:9755] [46470] (230 PDB entries)
      Uniprot P02185
    9. 1255600Species Yellowfin tuna (Thunnus albacares) [TaxId:8236] [46478] (1 PDB entry)
  24. 1255602Neuroglobin [100978] (2 species)
    1. 1255603Species Human (Homo sapiens) [TaxId:9606] [100979] (2 PDB entries)
    2. 1255609Species Mouse (Mus musculus) [TaxId:10090] [109625] (5 PDB entries)
      Uniprot Q9ER97
  25. 1255615Non-symbiotic plant hemoglobin [46484] (1 species)
  26. 1255623Trematode hemoglobin/myoglobin [63438] (1 species)
  27. 1255628automated matches [190359] (36 species)
    not a true protein
    1. 1255629Species Amphitrite ornata [TaxId:129555] [189339] (3 PDB entries)
    2. 1255636Species Ark clam (Scapharca inaequivalvis) [TaxId:6561] [187427] (31 PDB entries)
    3. 1255705Species Barley (Hordeum vulgare) [TaxId:4513] [187359] (1 PDB entry)
    4. 1255714Species Brycon cephalus [TaxId:126311] [188621] (1 PDB entry)
    5. 1255719Species Buffalo (Bubalus bubalis) [TaxId:89462] [188864] (1 PDB entry)
    6. 1255724Species Camel (Camelus dromedarius) [TaxId:9838] [189249] (1 PDB entry)
    7. 1255729Species Cat (Felis catus) [TaxId:9685] [188888] (4 PDB entries)
    8. 1255754Species Coturnix japonica [TaxId:93934] [189557] (1 PDB entry)
    9. 1255759Species Domestic pigeon (Columba livia) [TaxId:8932] [188616] (2 PDB entries)
    10. 1255772Species Duck (Anas platyrhynchos) [TaxId:8839] [189063] (1 PDB entry)
    11. 1255775Species Dusicyon thous [TaxId:9620] [187446] (1 PDB entry)
    12. 1255777Species Eleginops maclovinus [TaxId:56733] [193401] (1 PDB entry)
    13. 1255782Species Escherichia coli [TaxId:562] [196657] (1 PDB entry)
    14. 1255785Species Goat (Capra hircus) [TaxId:9925] [188635] (2 PDB entries)
    15. 1255798Species Guinea pig (Cavia porcellus) [TaxId:10141] [189281] (2 PDB entries)
    16. 1255803Species Human (Homo sapiens) [TaxId:9606] [188371] (5 PDB entries)
    17. 1255820Species Isurus oxyrinchus [TaxId:57983] [189618] (1 PDB entry)
    18. 1255825Species Lepus europaeus [TaxId:9983] [189630] (1 PDB entry)
    19. 1255830Species Maize (Zea mays) [TaxId:76912] [188014] (1 PDB entry)
    20. 1255835Species Mammuthus primigenius [TaxId:37349] [194337] (3 PDB entries)
    21. 1255844Species Mouse (Mus musculus) [TaxId:10090] [187190] (2 PDB entries)
    22. 1255850Species Norway rat (Rattus norvegicus) [TaxId:10116] [188924] (2 PDB entries)
    23. 1255857Species Parasponia andersonii [TaxId:3476] [193708] (1 PDB entry)
    24. 1255860Species Peromyscus maniculatus [TaxId:10042] [196779] (1 PDB entry)
    25. 1255862Species Podocnemis unifilis [TaxId:227871] [189922] (2 PDB entries)
    26. 1255867Species Pteropus giganteus [TaxId:143291] [188768] (1 PDB entry)
    27. 1255870Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [188592] (1 PDB entry)
    28. 1255875Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [188309] (2 PDB entries)
    29. 1255884Species Sheep (Ovis aries) [TaxId:9940] [188522] (1 PDB entry)
    30. 1255889Species Sperm whale (Physeter catodon) [TaxId:9755] [188226] (6 PDB entries)
    31. 1255896Species Struthio camelus [TaxId:8801] [188835] (1 PDB entry)
    32. 1255901Species Thunnus atlanticus [TaxId:48168] [187921] (8 PDB entries)
    33. 1255910Species Thunnus orientalis [TaxId:8238] [187933] (1 PDB entry)
    34. 1255912Species Trema tomentosa [TaxId:3480] [196352] (1 PDB entry)
    35. 1255915Species Turkey (Meleagris gallopavo) [TaxId:9103] [189160] (2 PDB entries)
    36. 1255924Species Yellow perch (Perca flavescens) [TaxId:8167] [188574] (3 PDB entries)

More info for Family a.1.1.2: Globins

Timeline for Family a.1.1.2: Globins: