Lineage for d4op7b_ (4op7 B:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822534Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2822535Protein automated matches [190988] (51 species)
    not a true protein
  7. 2822890Species Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId:1241973] [419916] (10 PDB entries)
  8. 2822901Domain d4op7b_: 4op7 B: [414090]
    Other proteins in same PDB: d4op7a2
    automated match to d5or7a_
    complexed with imd

Details for d4op7b_

PDB Entry: 4op7 (more details), 1.92 Å

PDB Description: crystal structure of p domain from norovirus strain nsw0514 in complex with hbga type b (triglycan)
PDB Compounds: (B:) vp1

SCOPe Domain Sequences for d4op7b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4op7b_ b.121.4.0 (B:) automated matches {Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId: 1241973]}
kpfsvpvltveemtnsrfpipleklftgpssafvvqpqngrcttdgvllgttqlspvnic
tfrgdvthitgsrnytmnlasqnwndydpteeipaplgtpdfvgkiqgvltqttrtdgst
rghkatvytgsadfapklgrvqfetdtdrdfeanqntkftpvgviqdggtthrnepqqwv
lpsysgrnthnvhlapavaptfpgeqllffrstmpgcsgypnmdldcllpqewvqyfyqe
aapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvnqf
ytlapm

SCOPe Domain Coordinates for d4op7b_:

Click to download the PDB-style file with coordinates for d4op7b_.
(The format of our PDB-style files is described here.)

Timeline for d4op7b_:

  • d4op7b_ is new in SCOPe 2.08-stable