SCOPe 2.08: Family b.121.4.0: automated matches

Lineage for Family b.121.4.0: automated matches

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)
Family b.121.4.0: automated matches [191569] (1 protein)
not a true family

Protein:

automated matches [190988] (51 species)
not a true protein
1. Species Aichivirus a [TaxId:72149] [312940] (1 PDB entry)
2. Species Bovine enterovirus (strain vg-5-27) [TaxId:12065] [395796] (2 PDB entries)
3. Species Coxsackievirus a10 [TaxId:42769] [359971] (7 PDB entries)
4. Species Coxsackievirus a16 (strain tainan/5079/98) [TaxId:231417] [277502] (1 PDB entry)
5. Species Coxsackievirus a16 [TaxId:31704] [276271] (7 PDB entries)
6. Species Coxsackievirus a6 [TaxId:86107] [339715] (1 PDB entry)
7. Species Echovirus e11 [TaxId:12078] [390854] (4 PDB entries)
8. Species Enterovirus a71 [TaxId:39054] [261947] (13 PDB entries)
9. Species Enterovirus d68 [TaxId:42789] [269068] (15 PDB entries)
10. Species Equine rhinitis a virus [TaxId:47000] [255665] (1 PDB entry)
11. Species Foot-and-mouth disease virus [TaxId:12122] [255672] (1 PDB entry)
12. Species Human calicivirus nlv/boxer/2001/us [TaxId:207658] [419923] (3 PDB entries)
13. Species Human calicivirus [TaxId:165510] [419866] (3 PDB entries)
14. Species Human coxsackievirus a16 [TaxId:31704] [256333] (2 PDB entries)
15. Species Human enterovirus 71 [TaxId:39054] [226325] (11 PDB entries)
16. Species Human enterovirus d68 [TaxId:42789] [401999] (2 PDB entries)
17. Species Human norovirus - alphatron [TaxId:106516] [420024] (4 PDB entries)
18. Species Human rhinovirus a serotype 89 (strain 41467-gallo) [TaxId:650130] [373873] (1 PDB entry)
19. Species Murine norovirus 1 [TaxId:223997] [372678] (13 PDB entries)
20. Species Murine norovirus gv/cr10/2005/usa [TaxId:463724] [347267] (2 PDB entries)
21. Species Norovirus 13-bh-1/2013/gii.17 [TaxId:1508693] [419959] (2 PDB entries)
22. Species Norovirus bo/giii/b309/2003/bel [TaxId:571217] [419953] (1 PDB entry)
23. Species Norovirus gii [TaxId:122929] [419975] (3 PDB entries)
24. Species Norovirus gii.10 [TaxId:747305] [419941] (9 PDB entries)
25. Species Norovirus gii.17 [TaxId:552592] [419995] (3 PDB entries)
26. Species Norovirus gii.4 [TaxId:489821] [419970] (1 PDB entry)
27. Species Norovirus gii/hu/jp/2002/gii.p16_gii.17/saitama/t87 [TaxId:1529916] [419958] (1 PDB entry)
28. Species Norovirus hu/gi.7/tch-060/usa/2003 [TaxId:1097017] [419920] (6 PDB entries)
29. Species Norovirus hu/gii-4/kumamoto5/2006/jp [TaxId:546987] [419917] (2 PDB entries)
30. Species Norovirus hu/gii-4/saga1/2006/jp [TaxId:546980] [419939] (1 PDB entry)
31. Species Norovirus hu/gii-4/saga4/2006/jp [TaxId:546981] [419938] (6 PDB entries)
32. Species Norovirus hu/gii.1/7ek/hawaii/1971/usa [TaxId:1208060] [419927] (3 PDB entries)
33. Species Norovirus hu/gii.13/10n4598/2010/np [TaxId:1313163] [419996] (2 PDB entries)
34. Species Norovirus hu/gii.17/c142/gf/1978 [TaxId:1204239] [419997] (1 PDB entry)
35. Species Norovirus hu/gii.2/kl109/1978/mys [TaxId:1260940] [419928] (1 PDB entry)
36. Species Norovirus hu/gii.4/2004/nl [TaxId:311380] [419873] (3 PDB entries)
37. Species Norovirus hu/gii.4/chdc2094/1974/us [TaxId:660656] [419967] (5 PDB entries)
38. Species Norovirus hu/gii.4/farmington hills/2004/usa [TaxId:1182143] [419915] (6 PDB entries)
39. Species Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId:1241973] [419916] (10 PDB entries)
40. Species Norovirus hu/gii/jp/2015/gii.p17_gii.17/kawasaki308 [TaxId:1634342] [419960] (2 PDB entries)
41. Species Norovirus nlv/if1998/2003/iraq [TaxId:286545] [419926] (1 PDB entry)
42. Species Norwalk virus [TaxId:11983] [419865] (22 PDB entries)
43. Species Norwalk-like virus sw/nlv/va34/1998/nl [TaxId:186636] [420022] (1 PDB entry)
44. Species Norwalk-like virus [TaxId:95340] [419833] (8 PDB entries)
45. Species Rhinovirus c [TaxId:463676] [319565] (2 PDB entries)
46. Species Ryegrass mottle virus [TaxId:119910] [225341] (1 PDB entry)
47. Species Seneca valley virus [TaxId:390157] [188689] (3 PDB entries)
48. Species Senecavirus a [TaxId:390157] [378534] (1 PDB entry)
49. Species Snow mountain virus [TaxId:52276] [371166] (2 PDB entries)
50. Species Coxsackievirus b5 [TaxId:12074] [422599] (1 PDB entry)
51. Species Desert shield virus [TaxId:33755] [423364] (1 PDB entry)

More info for Family b.121.4.0: automated matches

Timeline for Family b.121.4.0: automated matches:

Family b.121.4.0: automated matches first appeared in SCOPe 2.01
Family b.121.4.0: automated matches appears in SCOPe 2.07