Lineage for Species: Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId: 1241973]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822534Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2822535Protein automated matches [190988] (51 species)
    not a true protein
  7. 2822890Species Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId:1241973] [419916] (10 PDB entries)

PDB entries in Species: Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId: 1241973]:

  1. Domain(s) for 4oos:
  2. Domain(s) for 4op7:
    1. 2822900Domain d4op7a1: 4op7 A:225-530 [414088]
      Other proteins in same PDB: d4op7a2
      automated match to d5or7a_
      complexed with imd
    2. 2822901Domain d4op7b_: 4op7 B: [414090]
      Other proteins in same PDB: d4op7a2
      automated match to d5or7a_
      complexed with imd
  3. Domain(s) for 4wzt:
    1. 2822898Domain d4wzta1: 4wzt A:225-530 [414450]
      Other proteins in same PDB: d4wzta2
      automated match to d5or7a_
      complexed with edo
    2. 2822899Domain d4wztb_: 4wzt B: [414452]
      Other proteins in same PDB: d4wzta2
      automated match to d5or7a_
      complexed with edo
  4. Domain(s) for 4x0c:
    1. 2822896Domain d4x0ca_: 4x0c A: [414469]
      Other proteins in same PDB: d4x0cb2
      automated match to d5or7a_
      complexed with edo, fmt
    2. 2822897Domain d4x0cb1: 4x0c B:225-530 [414470]
      Other proteins in same PDB: d4x0cb2
      automated match to d5or7a_
      complexed with edo, fmt
  5. Domain(s) for 4x7d:
    1. 2822906Domain d4x7da1: 4x7d A:225-530 [409636]
      Other proteins in same PDB: d4x7da2, d4x7db2, d4x7dc_, d4x7dd1, d4x7dd2
      automated match to d5or7a_
      complexed with edo
    2. 2822907Domain d4x7db1: 4x7d B:225-530 [409638]
      Other proteins in same PDB: d4x7da2, d4x7db2, d4x7dc_, d4x7dd1, d4x7dd2
      automated match to d5or7a_
      complexed with edo
  6. Domain(s) for 5j35:
    1. 2822891Domain d5j35a1: 5j35 A:225-530 [414935]
      Other proteins in same PDB: d5j35a2, d5j35b2
      automated match to d5or7a_
      complexed with edo
    2. 2822892Domain d5j35b1: 5j35 B:225-530 [414937]
      Other proteins in same PDB: d5j35a2, d5j35b2
      automated match to d5or7a_
      complexed with edo
  7. Domain(s) for 5j3o:
    1. 2822893Domain d5j3oa1: 5j3o A:225-530 [414939]
      Other proteins in same PDB: d5j3oa2, d5j3ob2
      automated match to d5or7a_
      complexed with edo, fuc
    2. 2822894Domain d5j3ob1: 5j3o B:225-530 [414941]
      Other proteins in same PDB: d5j3oa2, d5j3ob2
      automated match to d5or7a_
      complexed with edo, fuc
  8. Domain(s) for 5lfe:
    1. 2822904Domain d5lfea1: 5lfe A:225-530 [415020]
      Other proteins in same PDB: d5lfea2
      automated match to d5or7a_
    2. 2822905Domain d5lfeb_: 5lfe B: [415022]
      Other proteins in same PDB: d5lfea2
      automated match to d5or7a_
  9. Domain(s) for 6ewb:
    1. 2822908Domain d6ewba1: 6ewb A:225-530 [411091]
      Other proteins in same PDB: d6ewba2, d6ewbc2, d6ewbd2, d6ewbe1, d6ewbe2, d6ewbf1, d6ewbf2, d6ewbg1, d6ewbg2, d6ewbh1, d6ewbh2, d6ewbi1, d6ewbi2, d6ewbj1, d6ewbj2, d6ewbk1, d6ewbk2, d6ewbl1, d6ewbl2
      automated match to d5or7a_
      complexed with edo
    2. 2822909Domain d6ewbb_: 6ewb B: [411093]
      Other proteins in same PDB: d6ewba2, d6ewbc2, d6ewbd2, d6ewbe1, d6ewbe2, d6ewbf1, d6ewbf2, d6ewbg1, d6ewbg2, d6ewbh1, d6ewbh2, d6ewbi1, d6ewbi2, d6ewbj1, d6ewbj2, d6ewbk1, d6ewbk2, d6ewbl1, d6ewbl2
      automated match to d5or7a_
      complexed with edo
    3. 2822910Domain d6ewbc1: 6ewb C:225-530 [411094]
      Other proteins in same PDB: d6ewba2, d6ewbc2, d6ewbd2, d6ewbe1, d6ewbe2, d6ewbf1, d6ewbf2, d6ewbg1, d6ewbg2, d6ewbh1, d6ewbh2, d6ewbi1, d6ewbi2, d6ewbj1, d6ewbj2, d6ewbk1, d6ewbk2, d6ewbl1, d6ewbl2
      automated match to d5or7a_
      complexed with edo
    4. 2822911Domain d6ewbd1: 6ewb D:225-530 [411096]
      Other proteins in same PDB: d6ewba2, d6ewbc2, d6ewbd2, d6ewbe1, d6ewbe2, d6ewbf1, d6ewbf2, d6ewbg1, d6ewbg2, d6ewbh1, d6ewbh2, d6ewbi1, d6ewbi2, d6ewbj1, d6ewbj2, d6ewbk1, d6ewbk2, d6ewbl1, d6ewbl2
      automated match to d5or7a_
      complexed with edo
  10. Domain(s) for 7jie:
    1. 2822902Domain d7jiea_: 7jie A: [412487]
      Other proteins in same PDB: d7jiec_, d7jied1, d7jied2, d7jiee_, d7jief1, d7jief2
      automated match to d5or7a_
    2. 2822903Domain d7jieb_: 7jie B: [412488]
      Other proteins in same PDB: d7jiec_, d7jied1, d7jied2, d7jiee_, d7jief1, d7jief2
      automated match to d5or7a_

More info for Species Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId:1241973] from b.121.4.0 automated matches

Timeline for Species Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId:1241973] from b.121.4.0 automated matches:

  • Species Norovirus hu/gii.4/sydney/nsw0514/2012/au [TaxId:1241973] from b.121.4.0 automated matches is new in SCOPe 2.08-stable