Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) consists of one domain of this fold |
Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins) |
Protein automated matches [190209] (5 species) not a true protein |
Species Human immunodeficiency virus 1 [TaxId:11676] [186963] (69 PDB entries) |
Domain d6um8a_: 6um8 A: [381975] Other proteins in same PDB: d6um8b2 automated match to d3vq9c_ protein/DNA complex; protein/RNA complex; complexed with 1pe, peg, qcg, so4 |
PDB Entry: 6um8 (more details), 2.33 Å
SCOPe Domain Sequences for d6um8a_:
Sequence, based on SEQRES records: (download)
>d6um8a_ c.55.3.2 (A:) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]} spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd ngsnftsttvkaacewagikqefgipynpqsqgviesmnkelkkiigqvrdqaehlktav qmavfihnkkrkggiggysagerivdiiatdiq
>d6um8a_ c.55.3.2 (A:) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]} spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd ngsnftsttvkaacewagikqefgviesmnkelkkiigqvrdqaehlktavqmavfihnk krgysagerivdiiatdiq
Timeline for d6um8a_: