SCOPe 2.08: Domain d5xs4b_: 5xs4 B:

Lineage for d5xs4b_ (5xs4 B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (51 species)
   not a true protein

7. Species Coxsackievirus a6 [TaxId:86107] [339715] (1 PDB entry)

8. Domain d5xs4b_: 5xs4 B: [339716]
   Other proteins in same PDB: d5xs4c_
   automated match to d4jgyb_

Details for d5xs4b_

PDB Entry: 5xs4, 3.1 Å

PDB Description: structure of coxsackievirus a6 (cva6) virus a-particle

PDB Compounds: (B:) Genome polyprotein

SCOPe Domain Sequences for d5xs4b_:

Sequence, based on SEQRES records:

>d5xs4b_ b.121.4.0 (B:) automated matches {Coxsackievirus a6 [TaxId: 86107]}
nivlsygewpeycpstdatavdkptrpdvsvnrfytlstkswktestgwywkfpdvlndt
gvfgqnaqfhylyrsgfcmhvqcnaskfhqgallvaaipefviaasspatkpngrglypd
fahtnpgkdgqefrdpyvldagiplsqalvfphqwinlrtnncatiimpyvnalpfdsal
nhsnfglvvipisplkycngattevpvtltiaplnsefsgl

Sequence, based on observed residues (ATOM records):

>d5xs4b_ b.121.4.0 (B:) automated matches {Coxsackievirus a6 [TaxId: 86107]}
nivlsygewpeycptrpdvsvnrfytlstkswktestgwywkfpdvlndtgvfgqnaqfh
ylyrsgfcmhvqcnaskfhqgallvaaipefviaassplypdfahtnpgkdgqefrdpyv
ldagiplsqalvfphqwinlrtnncatiimpyvnalpfdsalnhsnfglvvipisplkyc
ngattevpvtltiaplnsefsgl

Timeline for d5xs4b_:

• d5xs4b_ first appeared in SCOPe 2.06
  
• d5xs4b_ appears in SCOPe 2.07