Lineage for d1c0ma2 (1c0m A:49-216)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2124026Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 protein domains)
  6. 2124027Protein Retroviral integrase, catalytic domain [53108] (4 species)
  7. 2124114Species Rous sarcoma virus RSV [TaxId:11886] [53109] (23 PDB entries)
  8. 2124137Domain d1c0ma2: 1c0m A:49-216 [33640]
    Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1

Details for d1c0ma2

PDB Entry: 1c0m (more details), 2.53 Å

PDB Description: crystal structure of rsv two-domain integrase
PDB Compounds: (A:) protein (integrase)

SCOPe Domain Sequences for d1c0ma2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1c0ma2 c.55.3.2 (A:49-216) Retroviral integrase, catalytic domain {Rous sarcoma virus RSV [TaxId: 11886]}

SCOPe Domain Coordinates for d1c0ma2:

Click to download the PDB-style file with coordinates for d1c0ma2.
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Timeline for d1c0ma2: