SCOPe 2.08: Protein: Retroviral integrase, catalytic domain

Lineage for Protein: Retroviral integrase, catalytic domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
Superfamily c.55.3: Ribonuclease H-like [53098] (18 families)
consists of one domain of this fold
Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)
Pfam PF00665
Protein Retroviral integrase, catalytic domain [53108] (5 species)

Species:

Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [267758] (4 PDB entries)
1. Domain for 4dmn:
  - Domain d4dmna_: 4dmn A: [219865]
    automated match to d4gw6a_
    complexed with 0l9, ars, so4
2. Domain for 4gvm:
  - Domain d4gvma_: 4gvm A: [197016]
    automated match to d1bl3c_
    complexed with ars, lf2; mutant
3. Domain for 4gw6:
  - Domain d4gw6a_: 4gw6 A: [197017]
    automated match to d1bl3c_
    complexed with ars, lf2
4. Domain for 4id1:
  - Domain d4id1a_: 4id1 A: [197249]
    automated match to d1bl3c_
    complexed with lf0, so4
Human immunodeficiency virus type 1 [TaxId:11676] [53110] (74 PDB entries)
1. Domain for 1b92:
  - Domain d1b92a_: 1b92 A: [33654]
    complexed with cac, so4
2. Domain for 1b9d:
  - Domain d1b9da_: 1b9d A: [33649]
    complexed with cac, so4
3. Domain for 1b9f:
  - Domain d1b9fa_: 1b9f A: [33648]
    complexed with cac, so4
4. Domain for 1bhl:
  - Domain d1bhla_: 1bhl A: [33662]
5. Domains for 1bi4:
  1. Domain d1bi4a_: 1bi4 A: [33666]
  2. Domain d1bi4b_: 1bi4 B: [33667]
  3. Domain d1bi4c_: 1bi4 C: [33668]
6. Domains for 1bis:
  1. Domain d1bisa_: 1bis A: [33650]
  2. Domain d1bisb_: 1bis B: [33651]
7. Domains for 1biu:
  1. Domain d1biua_: 1biu A: [33663]
    protein/DNA complex; complexed with mg
  2. Domain d1biub_: 1biu B: [33664]
    protein/DNA complex; complexed with mg
  3. Domain d1biuc_: 1biu C: [33665]
    protein/DNA complex; complexed with mg
8. Domains for 1biz:
  1. Domain d1biza_: 1biz A: [33652]
    complexed with cac
  2. Domain d1bizb_: 1biz B: [33653]
    complexed with cac
9. Domains for 1bl3:
  1. Domain d1bl3a_: 1bl3 A: [33655]
    complexed with mg
  2. Domain d1bl3b_: 1bl3 B: [33656]
    complexed with mg
  3. Domain d1bl3c_: 1bl3 C: [33657]
    complexed with mg
10. Domains for 1ex4:
  1. Domain d1ex4a2: 1ex4 A:56-222 [33670]
    Other proteins in same PDB: d1ex4a1, d1ex4b1
    complexed with cps
  2. Domain d1ex4b2: 1ex4 B:55-222 [33671]
    Other proteins in same PDB: d1ex4a1, d1ex4b1
    complexed with cps
11. Domains for 1exq:
  1. Domain d1exqa_: 1exq A: [33646]
    complexed with cd, cl, so4
  2. Domain d1exqb_: 1exq B: [33647]
    complexed with cd, cl, so4
12. Domain for 1hyv:
  - Domain d1hyva_: 1hyv A: [61424]
    protein/DNA complex; complexed with cl, so4, tta
13. Domain for 1hyz:
  - Domain d1hyza_: 1hyz A: [61426]
    protein/DNA complex; complexed with cl, so4, tto
14. Domain for 1itg:
  - Domain d1itga_: 1itg A: [33661]
    complexed with cac
15. Domains for 1k6y:
  1. Domain d1k6ya2: 1k6y A:56-210 [68240]
    Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1
    complexed with k, po4, zn
  2. Domain d1k6yb2: 1k6y B:56-212 [68242]
    Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1
    complexed with k, po4, zn
  3. Domain d1k6yc2: 1k6y C:56-209 [68244]
    Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1
    complexed with k, po4, zn
  4. Domain d1k6yd2: 1k6y D:56-211 [68246]
    Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1
    complexed with k, po4, zn
16. Domains for 1qs4:
  1. Domain d1qs4a_: 1qs4 A: [33658]
    protein/DNA complex; complexed with 100, mg
  2. Domain d1qs4b_: 1qs4 B: [33659]
    protein/DNA complex; complexed with 100, mg
  3. Domain d1qs4c_: 1qs4 C: [33660]
    protein/DNA complex; complexed with 100, mg
17. Domains for 2b4j:
  1. Domain d2b4ja_: 2b4j A: [127833]
    Other proteins in same PDB: d2b4jc1, d2b4jc2, d2b4jd2, d2b4jd3
    automated match to d1bi4c_
    complexed with gol, po4
  2. Domain d2b4jb_: 2b4j B: [127834]
    Other proteins in same PDB: d2b4jc1, d2b4jc2, d2b4jd2, d2b4jd3
    automated match to d1bi4c_
    complexed with gol, po4
18. Domain for 2itg:
  - Domain d2itga_: 2itg A: [33669]
19. Domains for 3ao1:
  1. Domain d3ao1a_: 3ao1 A: [172279]
    automated match to d1bi4c_
    protein/DNA complex; complexed with bzx, cd, so4
  2. Domain d3ao1b_: 3ao1 B: [172280]
    automated match to d1bi4c_
    protein/DNA complex; complexed with bzx, cd, so4
20. Domains for 3l3u:
  1. Domain d3l3ua_: 3l3u A: [236775]
    automated match to d3ao1a_
    complexed with so4
  2. Domain d3l3ub_: 3l3u B: [236773]
    automated match to d3ovnb_
    complexed with so4
21. Domains for 3l3v:
  1. Domain d3l3va_: 3l3v A: [236772]
    automated match to d3ao1b_
    protein/DNA complex; complexed with cd, so4
  2. Domain d3l3vb_: 3l3v B: [236774]
    automated match to d3ovnb_
    protein/DNA complex; complexed with cd, so4
22. Domains for 3ovn:
  1. Domain d3ovna_: 3ovn A: [183318]
    automated match to d1bi4c_
    protein/DNA complex; complexed with cd, mpv, so4
  2. Domain d3ovnb_: 3ovn B: [183319]
    automated match to d1bi4c_
    protein/DNA complex; complexed with cd, mpv, so4
23. Domains for 3vq4:
  1. Domain d3vq4a_: 3vq4 A: [218019]
    automated match to d2itga_
    protein/DNA complex; complexed with 0nx, cd, so4
  2. Domain d3vq4b_: 3vq4 B: [218020]
    automated match to d2itga_
    protein/DNA complex; complexed with 0nx, cd, so4
24. Domains for 3vq5:
  1. Domain d3vq5a_: 3vq5 A: [218021]
    automated match to d1bizb_
    protein/DNA complex; complexed with cd, cl, mmj, so4
  2. Domain d3vq5b_: 3vq5 B: [218022]
    automated match to d1bizb_
    protein/DNA complex; complexed with cd, cl, mmj, so4
25. Domains for 3vq6:
  1. Domain d3vq6a_: 3vq6 A: [218023]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with bck, cd, so4
  2. Domain d3vq6b_: 3vq6 B: [218024]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with bck, cd, so4
26. Domains for 3vq7:
  1. Domain d3vq7a_: 3vq7 A: [218025]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, snu, so4
  2. Domain d3vq7b_: 3vq7 B: [218026]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, snu, so4
27. Domains for 3vq8:
  1. Domain d3vq8a_: 3vq8 A: [218027]
    automated match to d1bizb_
    protein/DNA complex; complexed with bcu, cd, cl, so4
  2. Domain d3vq8b_: 3vq8 B: [218028]
    automated match to d1bizb_
    protein/DNA complex; complexed with bcu, cd, cl, so4
28. Domains for 3vq9:
  1. Domain d3vq9a_: 3vq9 A: [193266]
    automated match to d1bl3c_
    protein/DNA complex; complexed with fbb
  2. Domain d3vq9b_: 3vq9 B: [193267]
    automated match to d1bl3c_
    protein/DNA complex; complexed with fbb
  3. Domain d3vq9c_: 3vq9 C: [201255]
    automated match to d3vq9b_
    protein/DNA complex; complexed with fbb
29. Domains for 3vqa:
  1. Domain d3vqaa_: 3vqa A: [218029]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with cd, mwp, so4
  2. Domain d3vqab_: 3vqa B: [218030]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with cd, mwp, so4
30. Domains for 3vqb:
  1. Domain d3vqba_: 3vqb A: [218031]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, fbg, so4
  2. Domain d3vqbb_: 3vqb B: [218032]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, fbg, so4
31. Domains for 3vqc:
  1. Domain d3vqca_: 3vqc A: [218033]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, mpk, so4
  2. Domain d3vqcb_: 3vqc B: [218034]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, mpk, so4
32. Domains for 3vqd:
  1. Domain d3vqda_: 3vqd A: [218035]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, mok, so4
  2. Domain d3vqdb_: 3vqd B: [218036]
    automated match to d2itga_
    protein/DNA complex; complexed with cd, mok, so4
33. Domains for 3vqe:
  1. Domain d3vqea_: 3vqe A: [218037]
    automated match to d1bizb_
    protein/DNA complex; protein/RNA complex; complexed with cd, cl, fmq, so4
  2. Domain d3vqeb_: 3vqe B: [218038]
    automated match to d1bizb_
    protein/DNA complex; protein/RNA complex; complexed with cd, cl, fmq, so4
34. Domains for 3vqp:
  1. Domain d3vqpa_: 3vqp A: [218039]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with cd, cl, dbj, so4
  2. Domain d3vqpb_: 3vqp B: [218040]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with cd, cl, dbj, so4
35. Domains for 3vqq:
  1. Domain d3vqqa_: 3vqq A: [218041]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with bte, cd, so4
  2. Domain d3vqqb_: 3vqq B: [218042]
    automated match to d2itga_
    protein/DNA complex; protein/RNA complex; complexed with bte, cd, so4
36. Domain for 4lh4:
  - Domain d4lh4a_: 4lh4 A: [230119]
    automated match to d3vq9c_
    complexed with mg
37. Domain for 4lh5:
  - Domain d4lh5a_: 4lh5 A: [235372]
    automated match to d4lh4a_
    complexed with lf0, mg
38. Domains for 4nyf:
  1. Domain d4nyfa_: 4nyf A: [263234]
    automated match to d3vq9c_
    complexed with 4bi, cd
  2. Domain d4nyfb_: 4nyf B: [257202]
    automated match to d3vq9c_
    complexed with 4bi, cd
39. Domain for 4o0j:
  - Domain d4o0ja_: 4o0j A: [258020]
    automated match to d1b9da_
    complexed with lf8, so4
40. Domain for 4o55:
  - Domain d4o55a_: 4o55 A: [258022]
    automated match to d1b9da_
    complexed with lf9, so4
41. Domain for 4o5b:
  - Domain d4o5ba_: 4o5b A: [258021]
    automated match to d3vq9c_
    complexed with lf9, so4
42. Domain for 4ojr:
  - Domain d4ojra_: 4ojr A: [257277]
    automated match to d3vq9c_
    complexed with 2sq, cac, so4
43. Domains for 4ovl:
  1. Domain d4ovla_: 4ovl A: [237439]
    automated match to d4ah9a_
    complexed with 1td, acy, edo, gol, so4
  2. Domain d4ovlb_: 4ovl B: [237438]
    automated match to d4ah9a_
    complexed with 1td, acy, edo, gol, so4
44. Domain for 4tsx:
  - Domain d4tsxa_: 4tsx A: [261988]
    automated match to d3vq9c_
    protein/DNA complex; complexed with lf0, so4; mutant
45. Domains for 5eu7:
  1. Domain d5eu7a_: 5eu7 A: [323323]
    Other proteins in same PDB: d5eu7c1, d5eu7c2, d5eu7d1, d5eu7d2, d5eu7e_, d5eu7f_
    automated match to d1bisa_
  2. Domain d5eu7b_: 5eu7 B: [323362]
    Other proteins in same PDB: d5eu7c1, d5eu7c2, d5eu7d1, d5eu7d2, d5eu7e_, d5eu7f_
    automated match to d1bisa_
46. Domain for 5hrn:
  - Domain d5hrna_: 5hrn A: [327186]
    automated match to d3vq9c_
    protein/DNA complex; complexed with 65p, cac, edo, so4; mutant
47. Domain for 5hrp:
  - Domain d5hrpa_: 5hrp A: [327134]
    automated match to d3vq9c_
    protein/DNA complex; complexed with 65p, cac, edo, so4; mutant
48. Domain for 5hrr:
  - Domain d5hrra_: 5hrr A: [327195]
    automated match to d3vq9c_
    protein/DNA complex; complexed with 65p, cac, edo, so4; mutant
49. Domain for 5hrs:
  - Domain d5hrsa_: 5hrs A: [327148]
    automated match to d3vq9c_
    protein/DNA complex; complexed with 65p, cac, edo, so4; mutant
50. Domains for 5jl4:
  1. Domain d5jl4a_: 5jl4 A: [339781]
    automated match to d3vq9c_
    complexed with so4; mutant
  2. Domain d5jl4b_: 5jl4 B: [339782]
    automated match to d3vq9c_
    complexed with so4; mutant
51. Domain for 5kgw:
  - Domain d5kgwa_: 5kgw A: [324250]
    automated match to d1b9da_
    complexed with 7sk, so4
52. Domain for 5krs:
  - Domain d5krsa1: 5krs A:57-207 [323442]
    Other proteins in same PDB: d5krsa2
    automated match to d1biza_
    complexed with 6xi, dms
53. Domain for 5krt:
  - Domain d5krta1: 5krt A:57-207 [323407]
    Other proteins in same PDB: d5krta2
    automated match to d1biza_
    complexed with 6w6
54. Domain for 5oi3:
  - Domain d5oi3a_: 5oi3 A: [347150]
    automated match to d3vq9c_
    complexed with mg
55. Domain for 5oi8:
  - Domain d5oi8a_: 5oi8 A: [347323]
    automated match to d3vq9c_
    complexed with 9vn, mg, so4
56. Domain for 5oia:
  - Domain d5oiaa_: 5oia A: [347162]
    automated match to d3vq9c_
    complexed with 9vk, mg, so4
57. Domain for 6eb1:
  - Domain d6eb1a_: 6eb1 A: [365597]
    automated match to d3vq9c_
    complexed with j3m
58. Domain for 6eb2:
  - Domain d6eb2a_: 6eb2 A: [365596]
    automated match to d3vq9c_
    complexed with j3p
59. Domain for 6ex9:
  - Domain d6ex9a_: 6ex9 A: [353186]
    automated match to d1exqa_
60. Domain for 6jcf:
  - Domain d6jcfa_: 6jcf A: [370428]
    automated match to d3vq9c_
    complexed with cac
61. Domain for 6jcg:
  - Domain d6jcga_: 6jcg A: [370498]
    automated match to d3vq9c_
    complexed with cac
62. Domain for 6lmi:
  - Domain d6lmia_: 6lmi A: [390907]
    automated match to d1itga_
    complexed with edo, ej9, pge, so4
63. Domain for 6lmq:
  - Domain d6lmqa_: 6lmq A: [390944]
    automated match to d1itga_
    complexed with 940, pge, so4
64. Domain for 6ncj:
  - Domain d6ncja_: 6ncj A: [362276]
    automated match to d3vq9c_
    complexed with edo, kjj, so4
65. Domain for 6nuj:
  - Domain d6nuja_: 6nuj A: [378049]
    automated match to d3vq9c_
    complexed with l3d
66. Domains for 6vka:
  1. Domain d6vkaa_: 6vka A: [400650]
    automated match to d3vq9c_
    complexed with iod, qzv, so4
  2. Domain d6vkab_: 6vka B: [400671]
    automated match to d3vq9c_
    complexed with iod, qzv, so4
67. Domains for 6vlh:
  1. Domain d6vlha_: 6vlh A: [400654]
    automated match to d3vq9c_
    complexed with iod, r2a, so4
  2. Domain d6vlhb_: 6vlh B: [400677]
    automated match to d3vq9c_
    complexed with iod, r2a, so4
68. Domains for 6vrg:
  1. Domain d6vrga2: 6vrg A:56-211 [392787]
    Other proteins in same PDB: d6vrga1, d6vrgb1, d6vrgc1, d6vrgd1
    automated match to d1k6yb2
    complexed with k, po4, zn
  2. Domain d6vrgb2: 6vrg B:56-210 [392796]
    Other proteins in same PDB: d6vrga1, d6vrgb1, d6vrgc1, d6vrgd1
    automated match to d1k6ya2
    complexed with k, po4, zn
  3. Domain d6vrgc2: 6vrg C:56-210 [392808]
    Other proteins in same PDB: d6vrga1, d6vrgb1, d6vrgc1, d6vrgd1
    automated match to d1k6ya2
    complexed with k, po4, zn
  4. Domain d6vrgd2: 6vrg D:56-209 [392820]
    Other proteins in same PDB: d6vrga1, d6vrgb1, d6vrgc1, d6vrgd1
    automated match to d1k6ya2
    complexed with k, po4, zn
69. Domain for 6vx2:
  - Domain d6vx2a_: 6vx2 A: [400888]
    automated match to d3vq9c_
    complexed with iod, rqg, so4
70. Domain for 6w0u:
  - Domain d6w0ua_: 6w0u A: [400830]
    automated match to d3vq9c_
    complexed with iod, s0y, so4
71. Domain for 6wc8:
  - Domain d6wc8a_: 6wc8 A: [402677]
    automated match to d3vq9c_
    complexed with iod, so4, tqm
72. Domain for 6we7:
  - Domain d6we7a_: 6we7 A: [402704]
    automated match to d3vq9c_
    complexed with iod, so4, txm
73. Domain for 7d83:
  - Domain d7d83a_: 7d83 A: [398769]
    automated match to d1itga_
    complexed with gz9, so4
74. Domain for 7ke0:
  - Domain d7ke0a_: 7ke0 A: [422001]
    automated match to d3vq9c_
    complexed with wbv
Human spumaretrovirus [TaxID:11963] [419615] (6 PDB entries)
1. Domain for 3l2q:
  - Domain d3l2qa1: 3l2q A:107-315 [413293]
    Other proteins in same PDB: d3l2qa2, d3l2qa3
    protein/DNA complex; complexed with gol, zn
2. Domain for 3l2s:
  - Domain d3l2sa2: 3l2s A:107-315 [413297]
    Other proteins in same PDB: d3l2sa1, d3l2sa3
    automated match to d3l2qa1
    protein/DNA complex; complexed with gol, mn, nh4, zn
3. Domain for 3l2u:
  - Domain d3l2ua2: 3l2u A:107-315 [413300]
    Other proteins in same PDB: d3l2ua1, d3l2ua3
    automated match to d3l2qa1
    protein/DNA complex; complexed with elv, gol, mg, nh4, zn
4. Domain for 3s3n:
  - Domain d3s3na2: 3s3n A:107-315 [413409]
    Other proteins in same PDB: d3s3na1, d3s3na3
    automated match to d3l2qa1
    protein/DNA complex; complexed with dlu, gol, mg, nh4, so4, zn; mutant
5. Domain for 3s3o:
  - Domain d3s3oa2: 3s3o A:107-315 [413412]
    Other proteins in same PDB: d3s3oa1, d3s3oa3
    automated match to d3l2qa1
    protein/DNA complex; complexed with dlu, gol, hez, mg, nh4, so4, zn; mutant
6. Domains for 4ztj:
  1. Domain d4ztja2: 4ztj A:107-315 [414549]
    Other proteins in same PDB: d4ztja1, d4ztja3
    automated match to d3l2qa1
    protein/DNA complex; complexed with 4rt, gol, mg, so4, zn
  2. Domain d4ztjb_: 4ztj B: [414551]
    Other proteins in same PDB: d4ztja1, d4ztja3
    automated match to d3l2qa1
    protein/DNA complex; complexed with 4rt, gol, mg, so4, zn
Rous sarcoma virus RSV [TaxId:11886] [53109] (23 PDB entries)
1. Domain for 1a5v:
  - Domain d1a5va_: 1a5v A: [33629]
    complexed with mn, y3
2. Domain for 1a5w:
  - Domain d1a5wa_: 1a5w A: [33632]
    complexed with y3
3. Domain for 1a5x:
  - Domain d1a5xa_: 1a5x A: [33630]
    complexed with y3
4. Domain for 1asu:
  - Domain d1asua_: 1asu A: [33626]
    complexed with epe
5. Domain for 1asv:
  - Domain d1asva_: 1asv A: [33634]
6. Domain for 1asw:
  - Domain d1aswa_: 1asw A: [33627]
    complexed with epe, ipa
7. Domains for 1c0m:
  1. Domain d1c0ma2: 1c0m A:49-216 [33640]
    Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1
  2. Domain d1c0mb2: 1c0m B:54-216 [33641]
    Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1
  3. Domain d1c0mc2: 1c0m C:49-216 [33642]
    Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1
  4. Domain d1c0md2: 1c0m D:54-216 [33643]
    Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1
8. Domains for 1c1a:
  1. Domain d1c1aa2: 1c1a A:52-216 [33644]
    Other proteins in same PDB: d1c1aa1, d1c1ab1
  2. Domain d1c1ab2: 1c1a B:55-216 [33645]
    Other proteins in same PDB: d1c1aa1, d1c1ab1
9. Domain for 1cxq:
  - Domain d1cxqa_: 1cxq A: [33621]
    complexed with epe, gol
10. Domain for 1cxu:
  - Domain d1cxua_: 1cxu A: [33624]
    complexed with cit, gol
11. Domain for 1cz9:
  - Domain d1cz9a_: 1cz9 A: [33623]
    complexed with cit, so4
12. Domain for 1czb:
  - Domain d1czba_: 1czb A: [33622]
    complexed with epe
13. Domain for 1vsd:
  - Domain d1vsda_: 1vsd A: [33625]
    complexed with epe, mg
14. Domain for 1vse:
  - Domain d1vsea_: 1vse A: [33631]
    complexed with epe
15. Domain for 1vsf:
  - Domain d1vsfa_: 1vsf A: [33628]
    complexed with epe, mn
16. Domain for 1vsh:
  - Domain d1vsha_: 1vsh A: [33633]
    complexed with epe, zn
17. Domain for 1vsi:
  - Domain d1vsia_: 1vsi A: [33638]
    complexed with ca, epe
18. Domain for 1vsj:
  - Domain d1vsja_: 1vsj A: [33636]
    complexed with cd, epe
19. Domain for 1vsk:
  - Domain d1vska_: 1vsk A: [33639]
    mutant
20. Domain for 1vsl:
  - Domain d1vsla_: 1vsl A: [33637]
    complexed with zn; mutant
21. Domain for 1vsm:
  - Domain d1vsma_: 1vsm A: [33635]
22. Domains for 3o4n:
  1. Domain d3o4na_: 3o4n A: [182791]
    automated match to d1asua_
    complexed with mes, zn
  2. Domain d3o4nb_: 3o4n B: [182792]
    automated match to d1asua_
    complexed with mes, zn
23. Domain for 3o4q:
  - Domain d3o4qa_: 3o4q A: [182793]
    automated match to d1asua_
    complexed with flc

Simian immunodeficiency virus [TaxId:11723] [53111] (3 PDB entries)

Domains for 1c6v:
1. Domain d1c6va_: 1c6v A: [33672]
  Other proteins in same PDB: d1c6vx_
  mutant
2. Domain d1c6vb_: 1c6v B: [33673]
  Other proteins in same PDB: d1c6vx_
  mutant
3. Domain d1c6vc_: 1c6v C: [33674]
  Other proteins in same PDB: d1c6vx_
  mutant
4. Domain d1c6vd_: 1c6v D: [33675]
  Other proteins in same PDB: d1c6vx_
  mutant

Domains for 6rwm:

Domain d6rwmd1: 6rwm D:57-222 [380198]
Other proteins in same PDB: d6rwmc1, d6rwmc2, d6rwmd2, d6rwme1, d6rwme2, d6rwmf1, d6rwmk1, d6rwmk2, d6rwml2, d6rwmm1, d6rwmm2, d6rwmn1
automated match to d1ex4b2
protein/DNA complex; complexed with cl, klq, mg, zn

Domain d6rwml1: 6rwm L:57-222 [380238]
Other proteins in same PDB: d6rwmc1, d6rwmc2, d6rwmd2, d6rwme1, d6rwme2, d6rwmf1, d6rwmk1, d6rwmk2, d6rwml2, d6rwmm1, d6rwmm2, d6rwmn1
automated match to d1ex4b2
protein/DNA complex; complexed with cl, klq, mg, zn

Domains for 6rwn:

Domain d6rwnd1: 6rwn D:57-222 [380196]
Other proteins in same PDB: d6rwnc1, d6rwnc2, d6rwnd2, d6rwne1, d6rwne2, d6rwnf1, d6rwnk1, d6rwnk2, d6rwnl2, d6rwnm1, d6rwnm2, d6rwnn1
automated match to d1ex4b2
protein/DNA complex; complexed with cl, dlu, mg, zn

Domain d6rwnl1: 6rwn L:57-222 [380220]
Other proteins in same PDB: d6rwnc1, d6rwnc2, d6rwnd2, d6rwne1, d6rwne2, d6rwnf1, d6rwnk1, d6rwnk2, d6rwnl2, d6rwnm1, d6rwnm2, d6rwnn1
automated match to d1ex4b2
protein/DNA complex; complexed with cl, dlu, mg, zn

More info for Protein Retroviral integrase, catalytic domain from c.55.3.2: Retroviral integrase, catalytic domain

Timeline for Protein Retroviral integrase, catalytic domain from c.55.3.2: Retroviral integrase, catalytic domain:

Protein Retroviral integrase, catalytic domain from c.55.3.2: Retroviral integrase, catalytic domain first appeared (with stable ids) in SCOP 1.55
Protein Retroviral integrase, catalytic domain from c.55.3.2: Retroviral integrase, catalytic domain appears in SCOPe 2.07