Lineage for Family c.55.3.2: Retroviral integrase, catalytic domain

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2460924Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2462855Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) (S)
    consists of one domain of this fold
  5. 2463135Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 protein domains)

Protein Domains:

  1. 2463136Retroviral integrase, catalytic domain [53108] (4 species)
    1. 2463137Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [267758] (4 PDB entries)
    2. 2463142Species Human immunodeficiency virus type 1 [TaxId:11676] [53110] (56 PDB entries)
    3. 2463234Species Rous sarcoma virus RSV [TaxId:11886] [53109] (23 PDB entries)
    4. 2463263Species Simian immunodeficiency virus [TaxId:11723] [53111] (1 PDB entry)
  2. 2463268automated matches [190209] (5 species)
    not a true protein
    1. 2463269Species Human immunodeficiency virus 1 [TaxId:11676] [186963] (64 PDB entries)
    2. 2463390Species Human immunodeficiency virus type 1 [TaxId:11698] [195546] (3 PDB entries)
    3. 2463394Species Human immunodeficiency virus [TaxId:12721] [193331] (20 PDB entries)
    4. 2463435Species Mouse mammary tumor virus [TaxId:11757] [312887] (1 PDB entry)
    5. 2463440Species Rous sarcoma virus [TaxId:11888] [226667] (2 PDB entries)

More info for Family c.55.3.2: Retroviral integrase, catalytic domain

Timeline for Family c.55.3.2: Retroviral integrase, catalytic domain: