SCOPe 2.07: Domain d5vk4a1: 5vk4 A:15-168

Lineage for d5vk4a1 (5vk4 A:15-168)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.4: PurM N-terminal domain-like [55326] (2 families)

5. Family d.79.4.0: automated matches [227181] (1 protein)
   not a true family

6. Protein automated matches [226901] (10 species)
   not a true protein

7. Species Neisseria gonorrhoeae [TaxId:485] [334373] (1 PDB entry)

8. Domain d5vk4a1: 5vk4 A:15-168 [334374]
   Other proteins in same PDB: d5vk4a2, d5vk4b2
   automated match to d3p4ea1
   complexed with anp, mg

Details for d5vk4a1

PDB Entry: 5vk4, 2.65 Å

PDB Description: crystal structure of a phosphoribosylformylglycinamidine cyclo-ligase from neisseria gonorrhoeae bound to amppnp and magnesium

PDB Compounds: (A:) phosphoribosylformylglycinamidine cyclo-ligase

SCOPe Domain Sequences for d5vk4a1:

Sequence, based on SEQRES records:

>d5vk4a1 d.79.4.0 (A:15-168) automated matches {Neisseria gonorrhoeae [TaxId: 485]}
dagdqlvekikpfakrtmrpevlgdlggfgalveigkkyqnpvlvsgtdgvgtklklafd
wdkhdtvgidlvamsvndilvqgaeplffldyfacgkldvpratdvikgiaqgceesgca
liggetaempgmypvgeydlagfavgvvekenvi

Sequence, based on observed residues (ATOM records):

>d5vk4a1 d.79.4.0 (A:15-168) automated matches {Neisseria gonorrhoeae [TaxId: 485]}
dagdqlvekikpfakrtmrpevlgalveigkkyqnpvlvsgtdgvgtklklafdwdkhdt
vgidlvamsvndilvqgaeplffldyfacgkldvpratdvikgiaqgceesgcaligget
aempgmypvgeydlagfavgvvekenvi

Timeline for d5vk4a1:

• d5vk4a1 first appeared in SCOPe 2.06
  
• d5vk4a1 appears in the current release, SCOPe 2.08