SCOPe 2.08: Protein: Sialic acid-binding protein SiaP

Lineage for Protein: Sialic acid-binding protein SiaP

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
has additional insertions and/or extensions that are not grouped together
Protein Sialic acid-binding protein SiaP [254345] (1 species)
Pfam PF03480; TRAP transporter; homology to other Type II ESRs (Extracytoplasmic solute receptors) discussed in PubMed 16702222

Species:

Haemophilus influenzae [TaxId:727] [254778] (7 PDB entries)
1. Domains for 2cex:
  1. Domain d2cexa_: 2cex A: [241447]
    automated match to d2ceya_
    complexed with dan, gol, zn
    has additional insertions and/or extensions that are not grouped together
  2. Domain d2cexb_: 2cex B: [241448]
    automated match to d2ceya_
    complexed with dan, gol, zn
    has additional insertions and/or extensions that are not grouped together
  3. Domain d2cexc_: 2cex C: [241449]
    automated match to d2ceya_
    complexed with dan, gol, zn
    has additional insertions and/or extensions that are not grouped together
  4. Domain d2cexd_: 2cex D: [241450]
    automated match to d2ceya_
    complexed with dan, gol, zn
    has additional insertions and/or extensions that are not grouped together
2. Domain for 2cey:
  - Domain d2ceya_: 2cey A: [241451]
    complexed with zn
    has additional insertions and/or extensions that are not grouped together
3. Domain for 2v4c:
  - Domain d2v4ca1: 2v4c A:1-306 [365675]
    Other proteins in same PDB: d2v4ca2
    automated match to d2cexb_
    complexed with kdn
    has additional insertions and/or extensions that are not grouped together
4. Domain for 2wyk:
  - Domain d2wyka1: 2wyk A:1-306 [244355]
    Other proteins in same PDB: d2wyka2
    automated match to d2ceya_
    complexed with nge, scn
    has additional insertions and/or extensions that are not grouped together
5. Domain for 2xwi:
  - Domain d2xwia1: 2xwi A:1-306 [244597]
    Other proteins in same PDB: d2xwia2
    automated match to d2ceya_
    complexed with slb; mutant
    has additional insertions and/or extensions that are not grouped together
6. Domain for 2xwv:
  - Domain d2xwva1: 2xwv A:1-306 [244600]
    Other proteins in same PDB: d2xwva2
    automated match to d2ceya_
    complexed with slb
    has additional insertions and/or extensions that are not grouped together
7. Domain for 3b50:
  - Domain d3b50a1: 3b50 A:1-306 [245359]
    Other proteins in same PDB: d3b50a2
    automated match to d2ceya_
    complexed with slb
    has additional insertions and/or extensions that are not grouped together

More info for Protein Sialic acid-binding protein SiaP from c.94.1.1: Phosphate binding protein-like

Timeline for Protein Sialic acid-binding protein SiaP from c.94.1.1: Phosphate binding protein-like:

Protein Sialic acid-binding protein SiaP from c.94.1.1: Phosphate binding protein-like first appeared in SCOPe 2.04
Protein Sialic acid-binding protein SiaP from c.94.1.1: Phosphate binding protein-like appears in SCOPe 2.07