Lineage for d4l29r1 (4l29 R:1-99)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2745637Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 2745638Protein beta2-microglobulin [88600] (7 species)
  7. 2745653Species Human (Homo sapiens) [TaxId:9606] [88602] (480 PDB entries)
    Uniprot P61769 21-119 ! Uniprot P01884
  8. 2746298Domain d4l29r1: 4l29 R:1-99 [253502]
    Other proteins in same PDB: d4l29a1, d4l29a2, d4l29b2, d4l29c1, d4l29c2, d4l29d2, d4l29e1, d4l29e2, d4l29f2, d4l29g1, d4l29g2, d4l29h2, d4l29i1, d4l29i2, d4l29j2, d4l29k1, d4l29k2, d4l29l2, d4l29m1, d4l29m2, d4l29n2, d4l29o1, d4l29o2, d4l29p2, d4l29q1, d4l29q2, d4l29r2, d4l29s1, d4l29s2, d4l29t2, d4l29u1, d4l29u2, d4l29v2, d4l29w1, d4l29w2, d4l29x2, d4l29y1, d4l29y2, d4l29z2
    automated match to d1k5nb_
    complexed with cl, gol; mutant

Details for d4l29r1

PDB Entry: 4l29 (more details), 3.09 Å

PDB Description: Structure of wtMHC class I with NY-ESO1 double mutant
PDB Compounds: (R:) Beta-2-microglobulin

SCOPe Domain Sequences for d4l29r1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4l29r1 b.1.1.2 (R:1-99) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

SCOPe Domain Coordinates for d4l29r1:

Click to download the PDB-style file with coordinates for d4l29r1.
(The format of our PDB-style files is described here.)

Timeline for d4l29r1:

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Domains from same chain:
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d4l29r2
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Domains from other chains:
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d4l29a1, d4l29a2, d4l29b1, d4l29b2, d4l29c1, d4l29c2, d4l29d1, d4l29d2, d4l29e1, d4l29e2, d4l29f1, d4l29f2, d4l29g1, d4l29g2, d4l29h1, d4l29h2, d4l29i1, d4l29i2, d4l29j1, d4l29j2, d4l29k1, d4l29k2, d4l29l1, d4l29l2, d4l29m1, d4l29m2, d4l29n1, d4l29n2, d4l29o1, d4l29o2, d4l29p1, d4l29p2, d4l29q1, d4l29q2, d4l29s1, d4l29s2, d4l29t1, d4l29t2, d4l29u1, d4l29u2, d4l29v1, d4l29v2, d4l29w1, d4l29w2, d4l29x1, d4l29x2, d4l29y1, d4l29y2, d4l29z1, d4l29z2