Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1498423Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. 1498779Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (5 families) (S)
  5. 1499100Family a.102.4.0: automated matches [227201] (1 protein)
    not a true family
  6. 1499101Protein automated matches [226931] (6 species)
    not a true protein

Species:

  1. 1499102Artemisia annua [TaxId:35608] [226616] (2 PDB entries)
    1. Domain for 4fjq:
    2. Domain for 4gax:
  2. 1499105Gossypium arboreum [TaxId:29729] [225678] (2 PDB entries)
    1. Domains for 3g4d:
      1. 1499106Domain d3g4da1: 3g4d A:25-226 [210351]
        Other proteins in same PDB: d3g4da2, d3g4db2
        automated match to d1hxga1
        complexed with bme, gol
      2. 1499107Domain d3g4db1: 3g4d B:28-226 [210353]
        Other proteins in same PDB: d3g4da2, d3g4db2
        automated match to d1hxga1
        complexed with bme, gol
    2. Domains for 3g4f:
      1. 1499108Domain d3g4fa1: 3g4f A:25-226 [210355]
        Other proteins in same PDB: d3g4fa2, d3g4fb2
        automated match to d1hxga1
        complexed with bme, fpf, mg
      2. 1499109Domain d3g4fb1: 3g4f B:25-226 [210357]
        Other proteins in same PDB: d3g4fa2, d3g4fb2
        automated match to d1hxga1
        complexed with bme, fpf, mg
  3. 1499110Mentha spicata [TaxId:29719] [225228] (2 PDB entries)
    1. Domains for 2ong:
      1. 1499113Domain d2onga1: 2ong A:57-271 [205333]
        Other proteins in same PDB: d2onga2, d2ongb2
        automated match to d1n1ba1
        complexed with btb, fpg, mn
      2. 1499114Domain d2ongb1: 2ong B:57-271 [205335]
        Other proteins in same PDB: d2onga2, d2ongb2
        automated match to d1n1ba1
        complexed with btb, fpg, mn
    2. Domains for 2onh:
      1. 1499111Domain d2onha1: 2onh A:57-271 [205337]
        Other proteins in same PDB: d2onha2, d2onhb2
        automated match to d1n1ba1
        complexed with btb, f3p, mn
      2. 1499112Domain d2onhb1: 2onh B:57-271 [205339]
        Other proteins in same PDB: d2onha2, d2onhb2
        automated match to d1n1ba1
        complexed with btb, f3p, mn
  4. 1499115Populus tremula [TaxId:80863] [225927] (2 PDB entries)
    1. Domains for 3n0f:
      1. 1499116Domain d3n0fa1: 3n0f A:57-265 [213665]
        Other proteins in same PDB: d3n0fa2, d3n0fb2
        automated match to d1hxga1
      2. 1499117Domain d3n0fb1: 3n0f B:57-265 [213667]
        Other proteins in same PDB: d3n0fa2, d3n0fb2
        automated match to d1hxga1
    2. Domains for 3n0g:
      1. 1499118Domain d3n0ga1: 3n0g A:63-265 [213669]
        Other proteins in same PDB: d3n0ga2, d3n0gb2
        automated match to d1hxga1
        complexed with dst, mg
      2. 1499119Domain d3n0gb1: 3n0g B:63-265 [213671]
        Other proteins in same PDB: d3n0ga2, d3n0gb2
        automated match to d1hxga1
        complexed with dst, mg
  5. 1499120Salvia fruticosa [TaxId:268906] [225284] (1 PDB entry)
  6. 1499123Tobacco (Nicotiana tabacum) [TaxId:4097] [225865] (4 PDB entries)
    1. Domain for 3lz9:
    2. Domain for 3m00:
    3. Domain for 3m01:
    4. Domain for 3m02:

More info for Protein automated matches from a.102.4.0: automated matches

Timeline for Protein automated matches from a.102.4.0: automated matches: