Lineage for Protein: automated matches
- Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites
Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) 
Family c.1.8.7: NagZ-like [51553] (4 proteins)
Pfam PF00933; Glycosyl hydrolase family 3 domain
Some members have reversed beta strand compared to other members of fold
Protein automated matches [191056] (3 species)
not a true protein
Species:
Hordeum vulgare [TaxId:112509] [270740] (6 PDB entries) - Domain for 3wli:
Domain d3wlia1: 3wli A:-3-388 [270741]
Other proteins in same PDB: d3wlia2
automated match to d1x38a1
complexed with gol, nag, so4
- Domain for 3wlo:
Domain d3wloa1: 3wlo A:-3-388 [270752]
Other proteins in same PDB: d3wloa2
automated match to d1x38a1
complexed with bgc, nag, so4
- Domain for 3wlq:
Domain d3wlqa1: 3wlq A:-3-388 [270754]
Other proteins in same PDB: d3wlqa2
automated match to d1x38a1
complexed with gol, nag
- Domain for 3wlr:
Domain d3wlra1: 3wlr A:-3-388 [270773]
Other proteins in same PDB: d3wlra2
automated match to d1x38a1
complexed with gol, nag
- Domain for 3wls:
Domain d3wlsa1: 3wls A:-3-388 [270770]
Other proteins in same PDB: d3wlsa2
automated match to d1x38a1
complexed with gol, gs1, mgl, nag, so4
- Domain for 3wlt:
Domain d3wlta1: 3wlt A:-3-388 [270765]
Other proteins in same PDB: d3wlta2
automated match to d1x38a1
complexed with gol, gs1, mgl, nag, so4
- Domain for 3wli:
Thermotoga neapolitana [TaxId:309803] [255674] (2 PDB entries) - Domain for 2x40:
Domain d2x40a1: 2x40 A:2-319 [244404]
Other proteins in same PDB: d2x40a2, d2x40a3
automated match to d2x42a1
complexed with br, gol
- Domain for 2x41:
Domain d2x41a1: 2x41 A:2-319 [244407]
Other proteins in same PDB: d2x41a2, d2x41a3
automated match to d2x42a1
complexed with bgc, br
- Domain for 2x40:
Vibrio cholerae [TaxId:666] [188936] (2 PDB entries) - Domain for 3gs6:
Domain d3gs6a_: 3gs6 A: [176947]
automated match to d1tr9a_
complexed with gol, np6
- Domain for 3gsm:
Domain d3gsma_: 3gsm A: [176967]
automated match to d1tr9a_
complexed with gol, vpu
- Domain for 3gs6:
More info for Protein automated matches from c.1.8.7: NagZ-like
Timeline for Protein automated matches from c.1.8.7: NagZ-like:
- Protein automated matches from c.1.8.7: NagZ-like first appeared in SCOPe 2.01
- Protein automated matches from c.1.8.7: NagZ-like appears in SCOPe 2.04
- Protein automated matches from c.1.8.7: NagZ-like appears in SCOPe 2.06
- Protein automated matches from c.1.8.7: NagZ-like appears in the current release, SCOPe 2.08