| Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
| Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) ![]() |
| Family c.1.8.7: NagZ-like [51553] (4 proteins) Pfam PF00933; Glycosyl hydrolase family 3 domain Some members have reversed beta strand compared to other members of fold |
| Protein automated matches [191056] (3 species) not a true protein |
| Hordeum vulgare [TaxId:112509] [270740] (32 PDB entries) |
| Domain d3wlia1: 3wli A:1-388 [270741] Other proteins in same PDB: d3wlia2, d3wlia3 automated match to d1x38a1 complexed with gol, nag, so4 |
| Domain d3wloa1: 3wlo A:1-388 [270752] Other proteins in same PDB: d3wloa2, d3wloa3 automated match to d1x38a1 complexed with bgc, nag, so4 |
| Domain d3wlqa1: 3wlq A:1-388 [270754] Other proteins in same PDB: d3wlqa2, d3wlqa3 automated match to d1x38a1 complexed with gol, nag |
| Domain d3wlra1: 3wlr A:1-388 [270773] Other proteins in same PDB: d3wlra2, d3wlra3 automated match to d1x38a1 complexed with gol, nag |
| Domain d3wlta1: 3wlt A:1-388 [270765] Other proteins in same PDB: d3wlta2, d3wlta3 automated match to d1x38a1 complexed with gol, gs1, mgl, nag, so4 |
| Domain d6jg1a1: 6jg1 A:1-388 [390143] Other proteins in same PDB: d6jg1a2, d6jg1a3 automated match to d1x38a1 complexed with 1pe, gol, nag, so4 |
| Domain d6jg2a1: 6jg2 A:1-388 [390191] Other proteins in same PDB: d6jg2a2, d6jg2a3 automated match to d1x38a1 complexed with 1pe, bv6, gol, nag, so4 |
| Domain d6jg6a1: 6jg6 A:1-388 [390345] Other proteins in same PDB: d6jg6a2, d6jg6a3 automated match to d1x38a1 complexed with 1pe, gol, nag, so4; mutant |
| Domain d6jg7a1: 6jg7 A:1-388 [390168] Other proteins in same PDB: d6jg7a2, d6jg7a3 automated match to d1x38a1 complexed with 1pe, bgc, gol, nag, so4, u2a |
| Domain d6jgaa1: 6jga A:1-388 [390178] Other proteins in same PDB: d6jgaa2, d6jgaa3 automated match to d1x38a1 complexed with 1pe, 6bv, gol, nag, so4 |
| Domain d6jgba1: 6jgb A:1-388 [390146] Other proteins in same PDB: d6jgba2, d6jgba3 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6jgca1: 6jgc A:1-388 [390181] Other proteins in same PDB: d6jgca2, d6jgca3 automated match to d1x38a1 complexed with 1pe, act, glc, gol, nag, so4; mutant |
| Domain d6jgda1: 6jgd A:1-388 [390175] Other proteins in same PDB: d6jgda2, d6jgda3 automated match to d1x38a1 complexed with 1pe, act, gol, so4; mutant |
| Domain d6jgea1: 6jge A:1-388 [390195] Other proteins in same PDB: d6jgea2, d6jgea3 automated match to d1x38a1 complexed with 1pe, gol, nag, so4; mutant |
| Domain d6jgga1: 6jgg A:1-388 [390240] Other proteins in same PDB: d6jgga2, d6jgga3 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6jgka1: 6jgk A:1-388 [390246] Other proteins in same PDB: d6jgka2, d6jgka3 automated match to d1x38a1 complexed with 1pe, act, bgc, gol, nag, sgc, so4; mutant |
| Domain d6jgla1: 6jgl A:1-388 [390155] Other proteins in same PDB: d6jgla2, d6jgla3 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6jgna1: 6jgn A:1-388 [390162] Other proteins in same PDB: d6jgna2, d6jgna3 automated match to d1x38a1 complexed with 1pe, act, gol, lam, so4 |
| Domain d6jgoa1: 6jgo A:1-388 [390151] Other proteins in same PDB: d6jgoa2 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6jgpa1: 6jgp A:1-388 [390153] Other proteins in same PDB: d6jgpa2, d6jgpa3 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6jgqa1: 6jgq A:1-388 [390222] Other proteins in same PDB: d6jgqa2, d6jgqa3 automated match to d1x38a1 complexed with bgc, gol, nag, so4, u2a; mutant |
| Domain d6jgra1: 6jgr A:1-388 [390165] Other proteins in same PDB: d6jgra2, d6jgra3 automated match to d1x38a1 complexed with 1pe, act, gol, lam |
| Domain d6jgsa1: 6jgs A:1-388 [390244] Other proteins in same PDB: d6jgsa2 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6jgta1: 6jgt A:1-388 [390204] Other proteins in same PDB: d6jgta2, d6jgta3 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6k6va1: 6k6v A:0-388 [390422] Other proteins in same PDB: d6k6va2, d6k6va3 automated match to d1x38a1 complexed with act, bgc, gol, nag, so4, u1y; mutant |
| Domain d6kufa1: 6kuf A:0-388 [390592] Other proteins in same PDB: d6kufa2, d6kufa3 automated match to d1x38a1 complexed with act, bgc, gol, nag, so4; mutant |
| Domain d6l1ja1: 6l1j A:1-388 [390835] Other proteins in same PDB: d6l1ja2, d6l1ja3 automated match to d1x38a1 complexed with 1pe, act, gol, lam, nag, so4; mutant |
| Domain d6lbba1: 6lbb A:0-388 [390873] Other proteins in same PDB: d6lbba2, d6lbba3 automated match to d1x38a1 complexed with 1pe, act, gol, nag, so4; mutant |
| Domain d6lbva1: 6lbv A:0-388 [390882] Other proteins in same PDB: d6lbva2 automated match to d1x38a1 complexed with 1pe, act, bgc, gol, so4, u1y; mutant |
| Domain d6lc5a1: 6lc5 A:0-388 [390867] Other proteins in same PDB: d6lc5a2 automated match to d1x38a1 complexed with 1pe, 6bv, act, epe, gol, so4 |
| Domain d6md6a1: 6md6 A:0-388 [369400] Other proteins in same PDB: d6md6a2, d6md6a3 automated match to d1x38a1 complexed with 1pe, gol, nag, so4 |
| Domain d6mi1a1: 6mi1 A:0-388 [369378] Other proteins in same PDB: d6mi1a2, d6mi1a3 automated match to d1x38a1 complexed with bgc, gol, nag, so4, u1y |
| Thermotoga neapolitana [TaxId:309803] [255674] (4 PDB entries) |
| Domain d2wt3a1: 2wt3 A:2-319 [304608] Other proteins in same PDB: d2wt3a2, d2wt3a3 automated match to d2x41a1 complexed with bgc, br |
| Domain d2wt6a1: 2wt6 A:2-319 [304614] Other proteins in same PDB: d2wt6a2, d2wt6a3 automated match to d2x41a1 complexed with br, gol |
| Domain d2x40a1: 2x40 A:2-319 [244404] Other proteins in same PDB: d2x40a2, d2x40a3 automated match to d2x42a1 complexed with br, gol |
| Domain d2x41a1: 2x41 A:2-319 [244407] Other proteins in same PDB: d2x41a2, d2x41a3 automated match to d2x42a1 complexed with bgc, br |
| Vibrio cholerae [TaxId:666] [188936] (2 PDB entries) |
| Domain d3gs6a_: 3gs6 A: [176947] automated match to d1tr9a_ complexed with gol, np6 |
| Domain d3gsma_: 3gsm A: [176967] automated match to d1tr9a_ complexed with gol, vpu |
Timeline for Protein automated matches from c.1.8.7: NagZ-like: