Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2083464Family c.1.8.7: NagZ-like [51553] (4 protein domains)
    Pfam PF00933; Glycosyl hydrolase family 3 domain
    Some members have reversed beta strand compared to other members of fold
  6. 2083502Protein automated matches [191056] (3 species)
    not a true protein

Species:

  1. 2083503Hordeum vulgare [TaxId:112509] [270740] (6 PDB entries)
    1. Domain for 3wli:
    2. Domain for 3wlo:
    3. Domain for 3wlq:
    4. Domain for 3wlr:
    5. Domain for 3wls:
    6. Domain for 3wlt:
  2. 2083510Thermotoga neapolitana [TaxId:309803] [255674] (4 PDB entries)
    1. Domain for 2wt3:
    2. Domain for 2wt6:
    3. Domain for 2x40:
    4. Domain for 2x41:
  3. 2083515Vibrio cholerae [TaxId:666] [188936] (2 PDB entries)
    1. Domain for 3gs6:
    2. Domain for 3gsm:

More info for Protein automated matches from c.1.8.7: NagZ-like

Timeline for Protein automated matches from c.1.8.7: NagZ-like: