PDB entry 3gs6

View 3gs6 on RCSB PDB site
Description: Vibrio Cholerea family 3 glycoside hydrolase (NagZ)in complex with N-butyryl-PUGNAc
Class: hydrolase
Keywords: glycoside hydrolase family 3, Cell cycle, Cell division, Cell shape, Cell wall biogenesis/degradation, Glycosidase, Hydrolase, Peptidoglycan synthesis
Deposited on 2009-03-26, released 2009-06-30
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-08-17, with a file datestamp of 2011-08-12.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.184
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-hexosaminidase
    Species: Vibrio cholerae [TaxId:666]
    Gene: nagZ, VC_0692
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KU37 (0-End)
      • engineered (18)
      • engineered (21)
      • engineered (53)
    Domains in SCOPe 2.05: d3gs6a_
  • Heterogens: NP6, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gs6A (A:)
mgplwldvagyelsaedrailahptvggvilfgrnyhdnqqllalnkairqaaarpilig
vdqeggrvqrfregfsrippaqyyaraengvelaeqggwlmaaeliahdvdlsfapvldm
gfackaignrafgedvqtvlkhssaflrgmkavgmattgkhfpghgaviadshletpyde
retiaqdmaifraqieagvldammpahvvyphydaqpasgssywlkqvlreelgfkgivf
sddlsmegaavmggpvershqalvagcdmilicnkreaavevldnlpimevpqaeallkk
qqfsyselkrlerwqqasanmqrlieqfsehhhhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gs6A (A:)
mgplwldvagyelsaedrailahptvggvilfgrnyhdnqqllalnkairqaaarpilig
vdqeggrvqrfregfsrippaqyyaraengvelaeqggwlmaaeliahdvdlsfapvldm
gfackaignrafgedvqtvlkhssaflrgmkavgmattgkhfpghgavihletpyderet
iaqdmaifraqieagvldammpahvvyphydaqpasgssywlkqvlreelgfkgivfsdd
lsmvmggpvershqalvagcdmilicnkreaavevldnlpimevpqaeallkkqqfsyse
lkrlerwqqasanmqrlieqfs