Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2536142Fold d.9: IL8-like [54116] (2 superfamilies)
    beta(3)-alpha
  4. 2536143Superfamily d.9.1: Interleukin 8-like chemokines [54117] (2 families) (S)
    form dimers with different dimerisation modes
  5. 2536552Family d.9.1.0: automated matches [191483] (1 protein)
    not a true family
  6. 2536553Protein automated matches [190775] (3 species)
    not a true protein

Species:

  1. 2536554Human (Homo sapiens) [TaxId:9606] [188003] (13 PDB entries)
    1. Domain for 2l4n:
    2. Domains for 2mgs:
      1. 2536589Domain d2mgsa_: 2mgs A: [264402]
        automated match to d1o80a_
      2. 2536590Domain d2mgsb_: 2mgs B: [264403]
        automated match to d1o80a_
    3. Domain for 2mp1:
    4. Domains for 2q8r:
      1. 2536558Domain d2q8re_: 2q8r E: [167472]
        automated match to d1b50a_
      2. 2536559Domain d2q8rf_: 2q8r F: [167473]
        automated match to d1b50a_
      3. 2536560Domain d2q8rg_: 2q8r G: [167474]
        automated match to d1b50a_
      4. 2536561Domain d2q8rh_: 2q8r H: [167475]
        automated match to d1b50a_
    5. Domains for 2q8t:
      1. 2536580Domain d2q8ta_: 2q8t A: [167476]
        automated match to d1b50a_
      2. 2536581Domain d2q8tb_: 2q8t B: [167477]
        automated match to d1b50a_
      3. 2536582Domain d2q8tc_: 2q8t C: [167478]
        automated match to d1b50a_
      4. 2536583Domain d2q8td_: 2q8t D: [167479]
        automated match to d1b50a_
    6. Domains for 4mhe:
      1. 2536576Domain d4mhea1: 4mhe A:2-69 [263014]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d4mheb_
        complexed with act
      2. 2536577Domain d4mheb1: 4mhe B:2-69 [259371]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d2vxwa_
        complexed with act
      3. 2536578Domain d4mhec_: 4mhe C: [263015]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d4mheb_
        complexed with act
      4. 2536579Domain d4mhed_: 4mhe D: [263016]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d4mheb_
        complexed with act
    7. Domain for 4zai:
    8. Domains for 5cba:
      1. 2536586Domain d5cbae_: 5cba E: [278842]
        Other proteins in same PDB: d5cbaa_, d5cbab1, d5cbab2, d5cbac_, d5cbad1, d5cbad2
        automated match to d1ikma_
        complexed with edo, peg
      2. 2536587Domain d5cbaf_: 5cba F: [278843]
        Other proteins in same PDB: d5cbaa_, d5cbab1, d5cbab2, d5cbac_, d5cbad1, d5cbad2
        automated match to d1ikma_
        complexed with edo, peg
    9. Domains for 5cbe:
      1. 2536584Domain d5cbee_: 5cbe E: [278844]
        Other proteins in same PDB: d5cbea_, d5cbeb_, d5cbec_, d5cbed_
        automated match to d1ikma_
        complexed with edo
      2. 2536585Domain d5cbef_: 5cbe F: [278841]
        Other proteins in same PDB: d5cbea_, d5cbeb_, d5cbec_, d5cbed_
        automated match to d1ikma_
        complexed with edo
    10. Domains for 5eki:
      1. 2536562Domain d5ekia_: 5eki A: [323584]
        automated match to d2mp1a_
        complexed with so4
      2. 2536563Domain d5ekib_: 5eki B: [323612]
        automated match to d2mp1a_
        complexed with so4
      3. 2536564Domain d5ekic_: 5eki C: [323590]
        automated match to d2mp1a_
        complexed with so4
      4. 2536565Domain d5ekid_: 5eki D: [323586]
        automated match to d2mp1a_
        complexed with so4
      5. 2536566Domain d5ekie_: 5eki E: [323665]
        automated match to d2mp1a_
        complexed with so4
      6. 2536567Domain d5ekif_: 5eki F: [323602]
        automated match to d2mp1a_
        complexed with so4
    11. Domains for 5ltl:
      1. 2536555Domain d5ltla_: 5ltl A: [351881]
        automated match to d1huna_
        complexed with gol, na
      2. 2536556Domain d5ltlb_: 5ltl B: [351870]
        automated match to d1huna_
        complexed with gol, na
    12. Domains for 6vgj:
      1. 2536569Domain d6vgja_: 6vgj A: [392656]
        automated match to d5l7ma_
      2. 2536570Domain d6vgjb_: 6vgj B: [392690]
        automated match to d5l7ma_
      3. 2536571Domain d6vgjc_: 6vgj C: [392625]
        automated match to d5l7ma_
      4. 2536572Domain d6vgjd_: 6vgj D: [392631]
        automated match to d5l7ma_
      5. 2536573Domain d6vgje_: 6vgj E: [392671]
        automated match to d5l7ma_
      6. 2536574Domain d6vgjf_: 6vgj F: [392626]
        automated match to d5l7ma_
      7. 2536575Domain d6vgjg_: 6vgj G: [392621]
        automated match to d5l7ma_
    13. Domain for 7jny:
  2. 2536592Human herpesvirus 8 [TaxId:37296] [188205] (1 PDB entry)
  3. 2536597Mouse (Mus musculus) [TaxId:10090] [279523] (3 PDB entries)
    1. Domains for 4zlt:
      1. 2536598Domain d4zltf_: 4zlt F: [279524]
        automated match to d1b2ta_
        complexed with nag
      2. 2536599Domain d4zltl_: 4zlt L: [279525]
        automated match to d1b2ta_
        complexed with nag
    2. Domain for 5izb:
    3. Domain for 5l7m:

More info for Protein automated matches from d.9.1.0: automated matches

Timeline for Protein automated matches from d.9.1.0: automated matches: