Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2156493Fold d.9: IL8-like [54116] (2 superfamilies)
    beta(3)-alpha
  4. 2156494Superfamily d.9.1: Interleukin 8-like chemokines [54117] (2 families) (S)
    form dimers with different dimerisation modes
  5. 2156832Family d.9.1.0: automated matches [191483] (1 protein)
    not a true family
  6. 2156833Protein automated matches [190775] (3 species)
    not a true protein

Species:

  1. 2156834Human (Homo sapiens) [TaxId:9606] [188003] (10 PDB entries)
    1. Domain for 2l4n:
    2. Domains for 2mgs:
      1. 2156853Domain d2mgsa_: 2mgs A: [264402]
        automated match to d1o80a_
      2. 2156854Domain d2mgsb_: 2mgs B: [264403]
        automated match to d1o80a_
    3. Domain for 2mp1:
    4. Domains for 2q8r:
      1. 2156835Domain d2q8re_: 2q8r E: [167472]
        automated match to d1b50a_
      2. 2156836Domain d2q8rf_: 2q8r F: [167473]
        automated match to d1b50a_
      3. 2156837Domain d2q8rg_: 2q8r G: [167474]
        automated match to d1b50a_
      4. 2156838Domain d2q8rh_: 2q8r H: [167475]
        automated match to d1b50a_
    5. Domains for 2q8t:
      1. 2156839Domain d2q8ta_: 2q8t A: [167476]
        automated match to d1b50a_
      2. 2156840Domain d2q8tb_: 2q8t B: [167477]
        automated match to d1b50a_
      3. 2156841Domain d2q8tc_: 2q8t C: [167478]
        automated match to d1b50a_
      4. 2156842Domain d2q8td_: 2q8t D: [167479]
        automated match to d1b50a_
    6. Domains for 4mhe:
      1. 2156844Domain d4mhea1: 4mhe A:2-69 [263014]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d4mheb_
        complexed with act
      2. 2156845Domain d4mheb1: 4mhe B:2-69 [259371]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d2vxwa_
        complexed with act
      3. 2156846Domain d4mhec_: 4mhe C: [263015]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d4mheb_
        complexed with act
      4. 2156847Domain d4mhed_: 4mhe D: [263016]
        Other proteins in same PDB: d4mhea2, d4mheb2
        automated match to d4mheb_
        complexed with act
    7. Domain for 4zai:
    8. Domains for 5cba:
      1. 2156850Domain d5cbae_: 5cba E: [278842]
        Other proteins in same PDB: d5cbaa_, d5cbab1, d5cbab2, d5cbac_, d5cbad1, d5cbad2
        automated match to d1ikma_
        complexed with edo, peg
      2. 2156851Domain d5cbaf_: 5cba F: [278843]
        Other proteins in same PDB: d5cbaa_, d5cbab1, d5cbab2, d5cbac_, d5cbad1, d5cbad2
        automated match to d1ikma_
        complexed with edo, peg
    9. Domains for 5cbe:
      1. 2156848Domain d5cbee_: 5cbe E: [278844]
        Other proteins in same PDB: d5cbea_, d5cbeb_, d5cbec_, d5cbed_
        automated match to d1ikma_
        complexed with edo
      2. 2156849Domain d5cbef_: 5cbe F: [278841]
        Other proteins in same PDB: d5cbea_, d5cbeb_, d5cbec_, d5cbed_
        automated match to d1ikma_
        complexed with edo
    10. Domains for 5eki:
      1. 2280283Domain d5ekia_: 5eki A: [323584]
        automated match to d2mp1a_
        complexed with so4
      2. 2280285Domain d5ekid_: 5eki D: [323586]
        automated match to d2mp1a_
        complexed with so4
      3. 2280289Domain d5ekic_: 5eki C: [323590]
        automated match to d2mp1a_
        complexed with so4
      4. 2280301Domain d5ekif_: 5eki F: [323602]
        automated match to d2mp1a_
        complexed with so4
      5. 2280311Domain d5ekib_: 5eki B: [323612]
        automated match to d2mp1a_
        complexed with so4
      6. 2280364Domain d5ekie_: 5eki E: [323665]
        automated match to d2mp1a_
        complexed with so4
  2. 2156856Human herpesvirus 8 [TaxId:37296] [188205] (1 PDB entry)
  3. 2156861Mouse (Mus musculus) [TaxId:10090] [279523] (2 PDB entries)
    1. Domains for 4zlt:
      1. 2156862Domain d4zltf_: 4zlt F: [279524]
        automated match to d1b2ta_
        complexed with nag
      2. 2156863Domain d4zltl_: 4zlt L: [279525]
        automated match to d1b2ta_
        complexed with nag
    2. Domain for 5l7m:

More info for Protein automated matches from d.9.1.0: automated matches

Timeline for Protein automated matches from d.9.1.0: automated matches: