SCOPe 2.08: Domain d3nzwo_: 3nzw O:

Lineage for d3nzwo_ (3nzw O:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein Proteasome alpha subunit (non-catalytic) [56255] (10 species)
   contains an extension to the common fold at the N-terminus

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (240 PDB entries)
   The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)

8. Domain d3nzwo_: 3nzw O: [182687]
   Other proteins in same PDB: d3nzw1_, d3nzw2_, d3nzwb_, d3nzwc1, d3nzwc2, d3nzwd_, d3nzwf_, d3nzwg_, d3nzwh_, d3nzwi_, d3nzwj_, d3nzwk_, d3nzwl_, d3nzwm_, d3nzwn_, d3nzwp_, d3nzwq1, d3nzwq2, d3nzwr_, d3nzwt_, d3nzwu_, d3nzwv_, d3nzww_, d3nzwx_, d3nzwy_, d3nzwz_
   automated match to d1g65a_
   complexed with mes

Details for d3nzwo_

PDB Entry: 3nzw, 2.5 Å

PDB Description: Crystal structure of the yeast 20S proteasome in complex with 2b

PDB Compounds: (O:) Proteasome component Y7

SCOPe Domain Sequences for d3nzwo_:

Sequence; same for both SEQRES and ATOM records:

>d3nzwo_ d.153.1.4 (O:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mtdrysfslttfspsgklgqidyaltavkqgvtslgikatngvviatekksssplamset
lskvslltpdigavysgmgpdyrvlvdksrkvahtsykriygeypptkllvsevakimqe
atqsggvrpfgvslliaghdefngfslyqvdpsgsyfpwkataigkgsvaaktflekrwn
deleledaihialltlkesvegefngdtielaiigdenpdllgytgiptdkgprfrklts
qeindrleal

Timeline for d3nzwo_:

• d3nzwo_ first appeared in SCOPe 2.01
  
• d3nzwo_ appears in SCOPe 2.07