SCOPe 2.08: Domain d2z9ic2: 2z9i C:6-226

Lineage for d2z9ic2 (2z9i C:6-226)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)

5. Family b.47.1.1: Prokaryotic proteases [50495] (16 proteins)

6. Protein Protease PepD [141383] (1 species)

7. Species Mycobacterium tuberculosis [TaxId:1773] [141384] (2 PDB entries)
   Uniprot O53896 154-374
   Rv0983

8. Domain d2z9ic2: 2z9i C:6-226 [154253]
   Other proteins in same PDB: d2z9ia1, d2z9ib1, d2z9ic1
   automated match to d1y8ta2

Details for d2z9ic2

PDB Entry: 2z9i, 2 Å

PDB Description: Crystal structure of RV0983 from Mycobacterium tuberculosis- Proteolytically active form

PDB Compounds: (C:) probable serine protease pepd

SCOPe Domain Sequences for d2z9ic2:

Sequence, based on SEQRES records:

>d2z9ic2 b.47.1.1 (C:6-226) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
gsveqvaakvvpsvvmletdlgrqseegsgiilsaegliltnnhviaaaakpplgspppk
ttvtfsdgrtapftvvgadptsdiavvrvqgvsgltpislgsssdlrvgqpvlaigsplg
legtvttgivsalnrpvsttgeagnqntvldaiqtdaainpgnsggalvnmnaqlvgvns
aiatlgadsadaqsgsiglgfaipvdqakriadelistgka

Sequence, based on observed residues (ATOM records):

>d2z9ic2 b.47.1.1 (C:6-226) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
gsveqvaakvvpsvvmletdseegsgiilsaegliltnnhviaaaakpplgpppkttvtf
sdgrtapftvvgadptsdiavvrvqgvsgltpislgsssdlrvgqpvlaigsplglegtv
ttgivsalnrpvstqntvldaiqtdaainpgnsggalvnmnaqlvgvnsaiatlsgsigl
gfaipvdqakriadelistgka

Timeline for d2z9ic2:

• d2z9ic2 first appeared in SCOP 1.75
  
• d2z9ic2 appears in SCOPe 2.07