Lineage for Family b.47.1.1: Prokaryotic proteases

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. Family b.47.1.1: Prokaryotic proteases [50495] (16 proteins)

Proteins:

  1. Achromobacter protease [50496] (1 species)
  2. alpha-Lytic protease [50498] (1 species)
  3. Epidermolytic (exfoliative) toxin A [50510] (1 species)
    probable glutamic acid-specific protease
  4. Exfoliative toxin B [50512] (1 species)
  5. Glutamic acid-specific protease [50502] (1 species)
  6. Glutamyl endopeptidase [101811] (1 species)
  7. Mitochondrial serine protease HtrA2, catalytic domain [74971] (1 species)
  8. Protease A [50500] (1 species)
  9. Protease B [50508] (1 species)
  10. Protease Do (DegP, HtrA), catalytic domain [74969] (2 species)
    1. Species Escherichia coli [TaxId:562] [74970] (4 PDB entries)
    2. Species Thermotoga maritima [TaxId:2336] [89339] (1 PDB entry)
  11. Protease PepD [141383] (1 species)
  12. Serine proteinase [50506] (1 species)
  13. Stress sensor protease DegS, catalytic domain [110236] (1 species)
  14. Trypsin [50504] (1 species)
  15. V8 protease [101809] (1 species)
    glutamic acid-specific protease
  16. automated matches [190306] (9 species)
    not a true protein
    1. Species Escherichia coli K-12 [TaxId:83333] [225952] (8 PDB entries)
    2. Species Human (Homo sapiens) [TaxId:9606] [322167] (8 PDB entries)
    3. Species Lysobacter enzymogenes [TaxId:69] [189631] (4 PDB entries)
    4. Species Lysobacter sp. [TaxId:186334] [346641] (1 PDB entry)
    5. Species Staphylococcus aureus [TaxId:1280] [316235] (1 PDB entry)
    6. Species Staphylococcus epidermidis [TaxId:176280] [227720] (6 PDB entries)
    7. Species Staphylococcus pseudintermedius [TaxId:283734] [369806] (1 PDB entry)
    8. Species Streptomyces griseus [TaxId:1911] [187119] (8 PDB entries)
    9. Species Yersinia pestis [TaxId:214092] [317139] (1 PDB entry)

More info for Family b.47.1.1: Prokaryotic proteases

Timeline for Family b.47.1.1: Prokaryotic proteases: