SCOPe 2.08: Domain d2z9ia1: 2z9i A:227-314

Lineage for d2z9ia1 (2z9i A:227-314)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.36: PDZ domain-like [50155] (1 superfamily)
   contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix

4. Superfamily b.36.1: PDZ domain-like [50156] (7 families)
   peptide-binding domain

5. Family b.36.1.4: HtrA-like serine proteases [74933] (4 proteins)

6. Protein Protease PepD [141288] (1 species)

7. Species Mycobacterium tuberculosis [TaxId:1773] [141289] (2 PDB entries)
   Uniprot O53896 375-462
   Rv0983

8. Domain d2z9ia1: 2z9i A:227-314 [154248]
   Other proteins in same PDB: d2z9ia2, d2z9ib2, d2z9ic2
   automated match to d1y8ta1

Details for d2z9ia1

PDB Entry: 2z9i, 2 Å

PDB Description: Crystal structure of RV0983 from Mycobacterium tuberculosis- Proteolytically active form

PDB Compounds: (A:) probable serine protease pepd

SCOPe Domain Sequences for d2z9ia1:

Sequence, based on SEQRES records:

>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
shaslgvqvtndkdtlgakivevvaggaaanagvpkgvvvtkvddrpinsadalvaavrs
kapgatvaltfqdpsggsrtvqvtlgka

Sequence, based on observed residues (ATOM records):

>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
shaslgvqvtndktlgakivevvaggaaanagvpkgvvvtkvddrpinsadalvaavrsk
apgatvaltfqdpsggsrtvqvtlgka

Timeline for d2z9ia1:

• d2z9ia1 first appeared in SCOP 1.75
  
• d2z9ia1 appears in SCOPe 2.07