Lineage for d2ja8e1 (2ja8 E:2-143)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2121131Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 2121717Superfamily c.52.3: Eukaryotic RPB5 N-terminal domain [53036] (1 family) (S)
  5. 2121718Family c.52.3.1: Eukaryotic RPB5 N-terminal domain [53037] (2 protein domains)
  6. 2121719Protein Eukaryotic RPB5 N-terminal domain [53038] (2 species)
  7. 2121720Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [53039] (26 PDB entries)
    Uniprot P20434; part of multichain biological unit
  8. 2121744Domain d2ja8e1: 2ja8 E:2-143 [138227]
    Other proteins in same PDB: d2ja8a1, d2ja8b1, d2ja8c1, d2ja8c2, d2ja8d1, d2ja8e2, d2ja8f1, d2ja8g1, d2ja8g2, d2ja8h1, d2ja8i1, d2ja8i2, d2ja8j1, d2ja8k1, d2ja8l1
    automatically matched to d1i3qe1
    protein/DNA complex; protein/RNA complex; complexed with mg, zn

Details for d2ja8e1

PDB Entry: 2ja8 (more details), 3.8 Å

PDB Description: cpd lesion containing rna polymerase ii elongation complex d
PDB Compounds: (E:) DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide

SCOPe Domain Sequences for d2ja8e1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ja8e1 c.52.3.1 (E:2-143) Eukaryotic RPB5 N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2ja8e1:

Click to download the PDB-style file with coordinates for d2ja8e1.
(The format of our PDB-style files is described here.)

Timeline for d2ja8e1: